Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CDH6P55285 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.69□□□□□ -1.5
CDH6P55285 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH6P55285 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CDH6P55285 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH6P55285 AL031985.1-201ENST00000392713 418 ntBASIC5.69□□□□□ -1.5
CDH6P55285 OR6E1P-201ENST00000414424 923 ntBASIC5.69□□□□□ -1.5
CDH6P55285 AL596448.1-201ENST00000415024 392 ntBASIC5.69□□□□□ -1.5
CDH6P55285 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.69□□□□□ -1.5
CDH6P55285 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH6P55285 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.69□□□□□ -1.5
CDH6P55285 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.69□□□□□ -1.5
CDH6P55285 RPL36AP39-201ENST00000445859 318 ntBASIC5.69□□□□□ -1.5
CDH6P55285 SEPT10P1-201ENST00000517342 1162 ntBASIC5.69□□□□□ -1.5
CDH6P55285 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.69□□□□□ -1.5
CDH6P55285 AC135626.1-201ENST00000556983 435 ntBASIC5.69□□□□□ -1.5
CDH6P55285 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.69□□□□□ -1.5
CDH6P55285 AC007066.2-202ENST00000566531 914 ntBASIC5.69□□□□□ -1.5
CDH6P55285 AP000769.2-201ENST00000602344 396 ntBASIC5.69□□□□□ -1.5
CDH6P55285 uc_338.7-201ENST00000621834 124 ntBASIC5.69□□□□□ -1.5
CDH6P55285 CU639417.4-201ENST00000623928 207 ntBASIC5.69□□□□□ -1.5
CDH6P55285 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.69□□□□□ -1.5
CDH6P55285 AC097063.1-201ENST00000426714 1797 ntBASIC5.69□□□□□ -1.5
CDH6P55285 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDH6P55285 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDH6P55285 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.69□□□□□ -1.5
CDH6P55285 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CDH6P55285 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.69□□□□□ -1.5
CDH6P55285 AC100757.1-201ENST00000616872 1835 ntBASIC5.69□□□□□ -1.5
CDH6P55285 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDH6P55285 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDH6P55285 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH6P55285 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.68□□□□□ -1.5
CDH6P55285 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
CDH6P55285 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH6P55285 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.68□□□□□ -1.5
CDH6P55285 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH6P55285 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH6P55285 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH6P55285 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH6P55285 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CDH6P55285 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH6P55285 RN7SKP28-201ENST00000364770 305 ntBASIC5.68□□□□□ -1.5
CDH6P55285 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH6P55285 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CDH6P55285 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CDH6P55285 CDY17P-201ENST00000414121 1282 ntBASIC5.68□□□□□ -1.5
CDH6P55285 AL354766.1-201ENST00000423396 542 ntBASIC5.68□□□□□ -1.5
CDH6P55285 MRPS21P2-201ENST00000424704 264 ntBASIC5.68□□□□□ -1.5
CDH6P55285 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.68□□□□□ -1.5
CDH6P55285 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH6P55285 AC019185.1-201ENST00000442718 389 ntBASIC5.68□□□□□ -1.5
CDH6P55285 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.68□□□□□ -1.5
CDH6P55285 TAAR4P-201ENST00000454843 1039 ntBASIC5.68□□□□□ -1.5
CDH6P55285 AC117394.1-201ENST00000477323 567 ntBASIC5.68□□□□□ -1.5
CDH6P55285 RPSAP51-201ENST00000497462 645 ntBASIC5.68□□□□□ -1.5
CDH6P55285 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH6P55285 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH6P55285 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH6P55285 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH6P55285 MIR4505-201ENST00000582238 73 ntBASIC5.68□□□□□ -1.5
CDH6P55285 MIR7853-201ENST00000584820 132 ntBASIC5.68□□□□□ -1.5
CDH6P55285 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH6P55285 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH6P55285 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH6P55285 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH6P55285 AL162574.1-201ENST00000615702 950 ntBASIC5.68□□□□□ -1.5
CDH6P55285 AL118522.2-201ENST00000616045 615 ntBASIC5.68□□□□□ -1.5
CDH6P55285 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.68□□□□□ -1.5
CDH6P55285 AL357153.4-201ENST00000620487 1016 ntBASIC5.68□□□□□ -1.5
CDH6P55285 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.68□□□□□ -1.5
CDH6P55285 ICE2P1-201ENST00000512800 1849 ntBASIC5.68□□□□□ -1.5
CDH6P55285 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH6P55285 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH6P55285 AC109446.4-201ENST00000623235 2755 ntBASIC5.68□□□□□ -1.5
CDH6P55285 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH6P55285 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CDH6P55285 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH6P55285 AC003973.3-201ENST00000624863 2822 ntBASIC5.68□□□□□ -1.5
CDH6P55285 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH6P55285 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.68□□□□□ -1.5
CDH6P55285 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
CDH6P55285 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CDH6P55285 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDH6P55285 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.67□□□□□ -1.5
CDH6P55285 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CDH6P55285 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CDH6P55285 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.67□□□□□ -1.5
CDH6P55285 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH6P55285 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.67□□□□□ -1.5
CDH6P55285 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.67□□□□□ -1.5
CDH6P55285 AC068870.3-201ENST00000625077 2536 ntBASIC5.67□□□□□ -1.5
CDH6P55285 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH6P55285 RNU4-2-201ENST00000365668 141 ntBASIC5.67□□□□□ -1.5
CDH6P55285 ADAM24P-201ENST00000398655 2101 ntBASIC5.67□□□□□ -1.5
CDH6P55285 RN7SKP286-201ENST00000410894 299 ntBASIC5.67□□□□□ -1.5
CDH6P55285 TNPO1P1-201ENST00000423641 1138 ntBASIC5.67□□□□□ -1.5
CDH6P55285 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.67□□□□□ -1.5
CDH6P55285 AL161636.2-201ENST00000445179 927 ntBASIC5.67□□□□□ -1.5
CDH6P55285 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms