Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
HMGCS2P54868 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
HMGCS2P54868 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HMGCS2P54868 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HMGCS2P54868 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HMGCS2P54868 OR4F13P-202ENST00000560066 2054 ntBASIC6.26□□□□□ -1.41
HMGCS2P54868 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
HMGCS2P54868 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HMGCS2P54868 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.25□□□□□ -1.41
HMGCS2P54868 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HMGCS2P54868 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.25□□□□□ -1.41
HMGCS2P54868 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HMGCS2P54868 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
HMGCS2P54868 OFD1P17-201ENST00000437639 3018 ntBASIC6.25□□□□□ -1.41
HMGCS2P54868 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.25□□□□□ -1.41
HMGCS2P54868 RNA5SP251-201ENST00000410614 137 ntBASIC6.25□□□□□ -1.41
HMGCS2P54868 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.25□□□□□ -1.41
HMGCS2P54868 RPL7P56-201ENST00000429441 717 ntBASIC6.25□□□□□ -1.41
HMGCS2P54868 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.25□□□□□ -1.41
HMGCS2P54868 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.25□□□□□ -1.41
HMGCS2P54868 AC104634.1-201ENST00000452720 462 ntBASIC6.25□□□□□ -1.41
HMGCS2P54868 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.25□□□□□ -1.41
HMGCS2P54868 Z92846.1-201ENST00000456203 268 ntBASIC6.25□□□□□ -1.41
HMGCS2P54868 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6.25□□□□□ -1.41
HMGCS2P54868 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HMGCS2P54868 AC004980.4-201ENST00000513375 203 ntBASIC6.25□□□□□ -1.41
HMGCS2P54868 EIF3KP3-201ENST00000514461 639 ntBASIC6.25□□□□□ -1.41
HMGCS2P54868 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.25□□□□□ -1.41
HMGCS2P54868 YWHABP2-201ENST00000540201 713 ntBASIC6.25□□□□□ -1.41
HMGCS2P54868 AC122688.1-201ENST00000541494 223 ntBASIC6.25□□□□□ -1.41
HMGCS2P54868 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.25□□□□□ -1.41
HMGCS2P54868 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
HMGCS2P54868 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.25□□□□□ -1.41
HMGCS2P54868 AC104785.1-201ENST00000603220 588 ntBASIC6.25□□□□□ -1.41
HMGCS2P54868 AC091953.3-201ENST00000623220 236 ntBASIC6.25□□□□□ -1.41
HMGCS2P54868 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
HMGCS2P54868 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
HMGCS2P54868 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.25□□□□□ -1.41
HMGCS2P54868 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.25□□□□□ -1.41
HMGCS2P54868 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HMGCS2P54868 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.25□□□□□ -1.41
HMGCS2P54868 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.25□□□□□ -1.41
HMGCS2P54868 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HMGCS2P54868 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HMGCS2P54868 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.24□□□□□ -1.41
HMGCS2P54868 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.24□□□□□ -1.41
HMGCS2P54868 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HMGCS2P54868 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.24□□□□□ -1.41
HMGCS2P54868 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HMGCS2P54868 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.24□□□□□ -1.41
HMGCS2P54868 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMGCS2P54868 RN7SKP104-201ENST00000362605 328 ntBASIC6.24□□□□□ -1.41
HMGCS2P54868 MIR105-1-201ENST00000385222 81 ntBASIC6.24□□□□□ -1.41
HMGCS2P54868 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
HMGCS2P54868 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
HMGCS2P54868 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.24□□□□□ -1.41
HMGCS2P54868 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.24□□□□□ -1.41
HMGCS2P54868 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.24□□□□□ -1.41
HMGCS2P54868 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.24□□□□□ -1.41
HMGCS2P54868 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.24□□□□□ -1.41
HMGCS2P54868 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HMGCS2P54868 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.24□□□□□ -1.41
HMGCS2P54868 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.24□□□□□ -1.41
HMGCS2P54868 AC092647.2-201ENST00000452998 253 ntBASIC6.24□□□□□ -1.41
HMGCS2P54868 AZGP1P2-201ENST00000454506 345 ntBASIC6.24□□□□□ -1.41
HMGCS2P54868 AC092754.1-201ENST00000472975 479 ntBASIC6.24□□□□□ -1.41
HMGCS2P54868 RN7SL860P-201ENST00000473738 223 ntBASIC6.24□□□□□ -1.41
HMGCS2P54868 AC090142.2-201ENST00000483263 416 ntBASIC6.24□□□□□ -1.41
HMGCS2P54868 AC083982.1-201ENST00000485679 344 ntBASIC6.24□□□□□ -1.41
HMGCS2P54868 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.24□□□□□ -1.41
HMGCS2P54868 OR5AZ1P-201ENST00000527448 943 ntBASIC6.24□□□□□ -1.41
HMGCS2P54868 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.24□□□□□ -1.41
HMGCS2P54868 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.24□□□□□ -1.41
HMGCS2P54868 HNRNPCP1-201ENST00000556181 766 ntBASIC6.24□□□□□ -1.41
HMGCS2P54868 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.24□□□□□ -1.41
HMGCS2P54868 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.24□□□□□ -1.41
HMGCS2P54868 AC011447.4-201ENST00000587562 111 ntBASIC6.24□□□□□ -1.41
HMGCS2P54868 AC099494.2-201ENST00000623371 978 ntBASIC6.24□□□□□ -1.41
HMGCS2P54868 AL353662.3-201ENST00000625131 237 ntBASIC6.24□□□□□ -1.41
HMGCS2P54868 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
HMGCS2P54868 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
HMGCS2P54868 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMGCS2P54868 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HMGCS2P54868 AC006600.2-201ENST00000624834 2506 ntBASIC6.24□□□□□ -1.41
HMGCS2P54868 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
HMGCS2P54868 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
HMGCS2P54868 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
HMGCS2P54868 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC6.23□□□□□ -1.41
HMGCS2P54868 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMGCS2P54868 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMGCS2P54868 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMGCS2P54868 UGT2B24P-201ENST00000514441 1597 ntBASIC6.23□□□□□ -1.41
HMGCS2P54868 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMGCS2P54868 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMGCS2P54868 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HMGCS2P54868 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.23□□□□□ -1.41
HMGCS2P54868 SNORA51.8-201ENST00000384234 132 ntBASIC6.23□□□□□ -1.41
HMGCS2P54868 CHMP1B2P-201ENST00000399581 597 ntBASIC6.23□□□□□ -1.41
HMGCS2P54868 AL121977.1-201ENST00000401636 979 ntBASIC6.23□□□□□ -1.41
HMGCS2P54868 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms