Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.36
NUP98P52948 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NUP98P52948 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NUP98P52948 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NUP98P52948 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC6.58□□□□□ -1.36
NUP98P52948 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.58□□□□□ -1.36
NUP98P52948 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NUP98P52948 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NUP98P52948 RNA5SP428-201ENST00000365129 132 ntBASIC6.58□□□□□ -1.36
NUP98P52948 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.58□□□□□ -1.36
NUP98P52948 RPL37P18-201ENST00000411602 243 ntBASIC6.58□□□□□ -1.36
NUP98P52948 AC068138.1-201ENST00000412635 217 ntBASIC6.58□□□□□ -1.36
NUP98P52948 AC073465.2-201ENST00000440938 498 ntBASIC6.58□□□□□ -1.36
NUP98P52948 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC6.58□□□□□ -1.36
NUP98P52948 RN7SL459P-201ENST00000481078 302 ntBASIC6.58□□□□□ -1.36
NUP98P52948 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NUP98P52948 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.58□□□□□ -1.36
NUP98P52948 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.58□□□□□ -1.36
NUP98P52948 MIR3934-201ENST00000579806 107 ntBASIC6.58□□□□□ -1.36
NUP98P52948 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.58□□□□□ -1.36
NUP98P52948 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.58□□□□□ -1.36
NUP98P52948 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.58□□□□□ -1.36
NUP98P52948 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NUP98P52948 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
NUP98P52948 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NUP98P52948 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NUP98P52948 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NUP98P52948 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NUP98P52948 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NUP98P52948 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.57□□□□□ -1.36
NUP98P52948 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
NUP98P52948 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NUP98P52948 RPL26P29-201ENST00000415623 438 ntBASIC6.57□□□□□ -1.36
NUP98P52948 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.57□□□□□ -1.36
NUP98P52948 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.57□□□□□ -1.36
NUP98P52948 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6.57□□□□□ -1.36
NUP98P52948 COX6B1P5-201ENST00000509843 249 ntBASIC6.57□□□□□ -1.36
NUP98P52948 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.57□□□□□ -1.36
NUP98P52948 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.57□□□□□ -1.36
NUP98P52948 AC087283.1-201ENST00000604029 1074 ntBASIC6.57□□□□□ -1.36
NUP98P52948 MIR6810-201ENST00000622701 70 ntBASIC6.57□□□□□ -1.36
NUP98P52948 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.57□□□□□ -1.36
NUP98P52948 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NUP98P52948 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NUP98P52948 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
NUP98P52948 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.57□□□□□ -1.36
NUP98P52948 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
NUP98P52948 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NUP98P52948 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.57□□□□□ -1.36
NUP98P52948 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.57□□□□□ -1.36
NUP98P52948 MAPK10-270ENST00000641102 3538 ntBASIC6.57□□□□□ -1.36
NUP98P52948 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NUP98P52948 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NUP98P52948 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NUP98P52948 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.57□□□□□ -1.36
NUP98P52948 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
NUP98P52948 RN7SKP103-201ENST00000363848 320 ntBASIC6.57□□□□□ -1.36
NUP98P52948 MIR1182-201ENST00000408363 97 ntBASIC6.57□□□□□ -1.36
NUP98P52948 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
NUP98P52948 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NUP98P52948 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.57□□□□□ -1.36
NUP98P52948 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC6.57□□□□□ -1.36
NUP98P52948 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.57□□□□□ -1.36
NUP98P52948 RPL7P11-201ENST00000437586 658 ntBASIC6.57□□□□□ -1.36
NUP98P52948 AC112498.1-201ENST00000444401 332 ntBASIC6.57□□□□□ -1.36
NUP98P52948 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.57□□□□□ -1.36
NUP98P52948 NOP56P2-201ENST00000447491 769 ntBASIC6.57□□□□□ -1.36
NUP98P52948 TAAR4P-201ENST00000454843 1039 ntBASIC6.57□□□□□ -1.36
NUP98P52948 RPS4XP20-201ENST00000505751 772 ntBASIC6.57□□□□□ -1.36
NUP98P52948 AC092593.2-201ENST00000513866 913 ntBASIC6.57□□□□□ -1.36
NUP98P52948 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.57□□□□□ -1.36
NUP98P52948 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.57□□□□□ -1.36
NUP98P52948 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
NUP98P52948 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.57□□□□□ -1.36
NUP98P52948 MIR4330-201ENST00000579077 105 ntBASIC6.57□□□□□ -1.36
NUP98P52948 AC009027.1-201ENST00000604510 479 ntBASIC6.57□□□□□ -1.36
NUP98P52948 AC069542.2-201ENST00000624816 216 ntBASIC6.57□□□□□ -1.36
NUP98P52948 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NUP98P52948 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.57□□□□□ -1.36
NUP98P52948 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NUP98P52948 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NUP98P52948 AL021877.2-201ENST00000624442 10684 ntBASIC6.56□□□□□ -1.36
NUP98P52948 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC6.56□□□□□ -1.36
NUP98P52948 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NUP98P52948 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NUP98P52948 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NUP98P52948 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.56□□□□□ -1.36
NUP98P52948 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.56□□□□□ -1.36
NUP98P52948 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.56□□□□□ -1.36
NUP98P52948 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
NUP98P52948 U3.10-201ENST00000364459 214 ntBASIC6.56□□□□□ -1.36
NUP98P52948 RNA5SP505-201ENST00000364748 108 ntBASIC6.56□□□□□ -1.36
NUP98P52948 AL133482.1-201ENST00000415988 498 ntBASIC6.56□□□□□ -1.36
NUP98P52948 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.56□□□□□ -1.36
NUP98P52948 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.56□□□□□ -1.36
NUP98P52948 BTF3P13-201ENST00000513224 490 ntBASIC6.56□□□□□ -1.36
NUP98P52948 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.56□□□□□ -1.36
NUP98P52948 UBE2Q2P10-201ENST00000514854 900 ntBASIC6.56□□□□□ -1.36
NUP98P52948 SEPT10P1-201ENST00000517342 1162 ntBASIC6.56□□□□□ -1.36
NUP98P52948 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 352.7 ms