Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.27□□□□□ -1.41
NEK3P51956 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.27□□□□□ -1.41
NEK3P51956 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.27□□□□□ -1.41
NEK3P51956 AL139022.2-201ENST00000606934 443 ntBASIC6.27□□□□□ -1.41
NEK3P51956 AC006924.1-201ENST00000610750 559 ntBASIC6.27□□□□□ -1.41
NEK3P51956 AC092266.1-201ENST00000610958 165 ntBASIC6.27□□□□□ -1.41
NEK3P51956 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NEK3P51956 AP004607.9-201ENST00000618202 316 ntBASIC6.27□□□□□ -1.41
NEK3P51956 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.27□□□□□ -1.41
NEK3P51956 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.27□□□□□ -1.41
NEK3P51956 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NEK3P51956 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.27□□□□□ -1.41
NEK3P51956 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NEK3P51956 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
NEK3P51956 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NEK3P51956 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.27□□□□□ -1.41
NEK3P51956 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.27□□□□□ -1.41
NEK3P51956 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
NEK3P51956 AC083837.1-201ENST00000565297 2994 ntBASIC6.27□□□□□ -1.41
NEK3P51956 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NEK3P51956 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NEK3P51956 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.26□□□□□ -1.41
NEK3P51956 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NEK3P51956 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NEK3P51956 AC093225.1-201ENST00000506867 1408 ntBASIC6.26□□□□□ -1.41
NEK3P51956 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
NEK3P51956 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.26□□□□□ -1.41
NEK3P51956 QRSL1P1-201ENST00000400977 1540 ntBASIC6.26□□□□□ -1.41
NEK3P51956 AC018717.1-201ENST00000457712 1505 ntBASIC6.26□□□□□ -1.41
NEK3P51956 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NEK3P51956 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.26□□□□□ -1.41
NEK3P51956 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NEK3P51956 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
NEK3P51956 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.26□□□□□ -1.41
NEK3P51956 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NEK3P51956 OR4K17-201ENST00000315543 1032 ntBASIC6.26□□□□□ -1.41
NEK3P51956 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.26□□□□□ -1.41
NEK3P51956 SNORA51.9-201ENST00000384295 124 ntBASIC6.26□□□□□ -1.41
NEK3P51956 MIR320B1-201ENST00000390209 79 ntBASIC6.26□□□□□ -1.41
NEK3P51956 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.26□□□□□ -1.41
NEK3P51956 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NEK3P51956 PNRC2P1-201ENST00000423940 420 ntBASIC6.26□□□□□ -1.41
NEK3P51956 AC022022.1-201ENST00000430304 178 ntBASIC6.26□□□□□ -1.41
NEK3P51956 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC6.26□□□□□ -1.41
NEK3P51956 HMGN1P2-201ENST00000445197 310 ntBASIC6.26□□□□□ -1.41
NEK3P51956 AL035551.1-201ENST00000446931 348 ntBASIC6.26□□□□□ -1.41
NEK3P51956 AC112187.1-201ENST00000455837 479 ntBASIC6.26□□□□□ -1.41
NEK3P51956 RPS20P4-201ENST00000461659 355 ntBASIC6.26□□□□□ -1.41
NEK3P51956 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.26□□□□□ -1.41
NEK3P51956 RBBP4P1-201ENST00000502424 1276 ntBASIC6.26□□□□□ -1.41
NEK3P51956 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC6.26□□□□□ -1.41
NEK3P51956 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.26□□□□□ -1.41
NEK3P51956 CYP4F27P-201ENST00000514557 494 ntBASIC6.26□□□□□ -1.41
NEK3P51956 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NEK3P51956 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.26□□□□□ -1.41
NEK3P51956 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.26□□□□□ -1.41
NEK3P51956 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.26□□□□□ -1.41
NEK3P51956 RPA2P3-201ENST00000533268 770 ntBASIC6.26□□□□□ -1.41
NEK3P51956 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.26□□□□□ -1.41
NEK3P51956 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.26□□□□□ -1.41
NEK3P51956 AP000619.2-201ENST00000546014 969 ntBASIC6.26□□□□□ -1.41
NEK3P51956 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC6.26□□□□□ -1.41
NEK3P51956 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NEK3P51956 CD24P2-201ENST00000565486 219 ntBASIC6.26□□□□□ -1.41
NEK3P51956 AC106734.1-201ENST00000568646 663 ntBASIC6.26□□□□□ -1.41
NEK3P51956 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NEK3P51956 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.26□□□□□ -1.41
NEK3P51956 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.26□□□□□ -1.41
NEK3P51956 AC004890.3-201ENST00000605566 1095 ntBASIC6.26□□□□□ -1.41
NEK3P51956 AL591167.1-201ENST00000607321 456 ntBASIC6.26□□□□□ -1.41
NEK3P51956 AC024933.1-201ENST00000608472 348 ntBASIC6.26□□□□□ -1.41
NEK3P51956 AL391834.1-201ENST00000609609 560 ntBASIC6.26□□□□□ -1.41
NEK3P51956 AL359513.1-201ENST00000614364 557 ntBASIC6.26□□□□□ -1.41
NEK3P51956 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.26□□□□□ -1.41
NEK3P51956 AC004801.6-201ENST00000616571 978 ntBASIC6.26□□□□□ -1.41
NEK3P51956 AC007342.8-201ENST00000623278 678 ntBASIC6.26□□□□□ -1.41
NEK3P51956 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.26□□□□□ -1.41
NEK3P51956 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NEK3P51956 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
NEK3P51956 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.26□□□□□ -1.41
NEK3P51956 AL592429.1-201ENST00000403909 1473 ntBASIC6.26□□□□□ -1.41
NEK3P51956 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NEK3P51956 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NEK3P51956 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NEK3P51956 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.26□□□□□ -1.41
NEK3P51956 EIF3EP1-201ENST00000433978 1316 ntBASIC6.25□□□□□ -1.41
NEK3P51956 MTND4P9-201ENST00000507819 1346 ntBASIC6.25□□□□□ -1.41
NEK3P51956 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.25□□□□□ -1.41
NEK3P51956 AC092451.3-201ENST00000625067 1343 ntBASIC6.25□□□□□ -1.41
NEK3P51956 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.25□□□□□ -1.41
NEK3P51956 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.25□□□□□ -1.41
NEK3P51956 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NEK3P51956 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.25□□□□□ -1.41
NEK3P51956 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NEK3P51956 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
NEK3P51956 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
NEK3P51956 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NEK3P51956 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
NEK3P51956 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.25□□□□□ -1.41
NEK3P51956 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms