Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LHX1P48742 AC144833.1-201ENST00000567953 4089 ntBASIC5.87□□□□□ -1.47
LHX1P48742 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LHX1P48742 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LHX1P48742 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LHX1P48742 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LHX1P48742 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.86□□□□□ -1.47
LHX1P48742 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LHX1P48742 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.86□□□□□ -1.47
LHX1P48742 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
LHX1P48742 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LHX1P48742 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.86□□□□□ -1.47
LHX1P48742 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.86□□□□□ -1.47
LHX1P48742 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LHX1P48742 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
LHX1P48742 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.86□□□□□ -1.47
LHX1P48742 U3.10-201ENST00000364459 214 ntBASIC5.86□□□□□ -1.47
LHX1P48742 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
LHX1P48742 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.86□□□□□ -1.47
LHX1P48742 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
LHX1P48742 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LHX1P48742 AC117434.1-201ENST00000419971 836 ntBASIC5.86□□□□□ -1.47
LHX1P48742 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
LHX1P48742 RPL7P56-201ENST00000429441 717 ntBASIC5.86□□□□□ -1.47
LHX1P48742 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.86□□□□□ -1.47
LHX1P48742 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.86□□□□□ -1.47
LHX1P48742 MTCYBP14-201ENST00000457471 715 ntBASIC5.86□□□□□ -1.47
LHX1P48742 PSAT1P4-201ENST00000466500 526 ntBASIC5.86□□□□□ -1.47
LHX1P48742 AC135999.1-201ENST00000478962 479 ntBASIC5.86□□□□□ -1.47
LHX1P48742 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.86□□□□□ -1.47
LHX1P48742 RNU6-943P-201ENST00000516960 98 ntBASIC5.86□□□□□ -1.47
LHX1P48742 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.86□□□□□ -1.47
LHX1P48742 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.86□□□□□ -1.47
LHX1P48742 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.86□□□□□ -1.47
LHX1P48742 AC018690.1-201ENST00000608144 626 ntBASIC5.86□□□□□ -1.47
LHX1P48742 AL138960.1-201ENST00000613838 513 ntBASIC5.86□□□□□ -1.47
LHX1P48742 AC020658.4-201ENST00000613987 684 ntBASIC5.86□□□□□ -1.47
LHX1P48742 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.86□□□□□ -1.47
LHX1P48742 CASC19-264ENST00000641912 1184 ntBASIC5.86□□□□□ -1.47
LHX1P48742 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.86□□□□□ -1.47
LHX1P48742 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LHX1P48742 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.86□□□□□ -1.47
LHX1P48742 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.86□□□□□ -1.47
LHX1P48742 AC009962.1-201ENST00000567327 3813 ntBASIC5.86□□□□□ -1.47
LHX1P48742 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
LHX1P48742 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LHX1P48742 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LHX1P48742 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LHX1P48742 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LHX1P48742 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.85□□□□□ -1.47
LHX1P48742 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LHX1P48742 BX284613.1-201ENST00000452221 1641 ntBASIC5.85□□□□□ -1.47
LHX1P48742 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LHX1P48742 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.85□□□□□ -1.47
LHX1P48742 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.85□□□□□ -1.47
LHX1P48742 Z83820.1-201ENST00000456978 1499 ntBASIC5.85□□□□□ -1.47
LHX1P48742 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
LHX1P48742 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
LHX1P48742 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LHX1P48742 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
LHX1P48742 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.85□□□□□ -1.47
LHX1P48742 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.85□□□□□ -1.47
LHX1P48742 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.85□□□□□ -1.47
LHX1P48742 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LHX1P48742 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.85□□□□□ -1.47
LHX1P48742 AC097523.2-201ENST00000435551 652 ntBASIC5.85□□□□□ -1.47
LHX1P48742 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.85□□□□□ -1.47
LHX1P48742 AZGP1P2-201ENST00000454506 345 ntBASIC5.85□□□□□ -1.47
LHX1P48742 AC011225.1-201ENST00000457751 369 ntBASIC5.85□□□□□ -1.47
LHX1P48742 snoU13.29-201ENST00000459370 104 ntBASIC5.85□□□□□ -1.47
LHX1P48742 RPS26P39-201ENST00000469206 341 ntBASIC5.85□□□□□ -1.47
LHX1P48742 RPL7P39-201ENST00000481157 744 ntBASIC5.85□□□□□ -1.47
LHX1P48742 MTND3P6-201ENST00000485242 339 ntBASIC5.85□□□□□ -1.47
LHX1P48742 RN7SL447P-201ENST00000494711 245 ntBASIC5.85□□□□□ -1.47
LHX1P48742 GLUD1P3-202ENST00000508551 200 ntBASIC5.85□□□□□ -1.47
LHX1P48742 RNU6-1334P-201ENST00000516032 105 ntBASIC5.85□□□□□ -1.47
LHX1P48742 SCARNA16.4-201ENST00000516956 187 ntBASIC5.85□□□□□ -1.47
LHX1P48742 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.85□□□□□ -1.47
LHX1P48742 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.85□□□□□ -1.47
LHX1P48742 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LHX1P48742 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.85□□□□□ -1.47
LHX1P48742 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.85□□□□□ -1.47
LHX1P48742 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.85□□□□□ -1.47
LHX1P48742 BLZF2P-201ENST00000553776 1130 ntBASIC5.85□□□□□ -1.47
LHX1P48742 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.85□□□□□ -1.47
LHX1P48742 FKBP1AP1-201ENST00000594588 318 ntBASIC5.85□□□□□ -1.47
LHX1P48742 IMMP1LP3-201ENST00000604197 224 ntBASIC5.85□□□□□ -1.47
LHX1P48742 SUMO2P15-201ENST00000604285 278 ntBASIC5.85□□□□□ -1.47
LHX1P48742 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LHX1P48742 MTCO1P1-201ENST00000624263 1081 ntBASIC5.85□□□□□ -1.47
LHX1P48742 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.85□□□□□ -1.47
LHX1P48742 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LHX1P48742 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LHX1P48742 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LHX1P48742 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
LHX1P48742 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LHX1P48742 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.85□□□□□ -1.47
LHX1P48742 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
LHX1P48742 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
LHX1P48742 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms