Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.24□□□□□ -1.57
APOBEC1P41238 ELOCP3-201ENST00000439303 348 ntBASIC5.24□□□□□ -1.57
APOBEC1P41238 OR7E116P-201ENST00000448529 957 ntBASIC5.24□□□□□ -1.57
APOBEC1P41238 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
APOBEC1P41238 MTND6P32-201ENST00000457611 483 ntBASIC5.24□□□□□ -1.57
APOBEC1P41238 AC078857.1-201ENST00000469870 667 ntBASIC5.24□□□□□ -1.57
APOBEC1P41238 RPS17P15-201ENST00000475609 349 ntBASIC5.24□□□□□ -1.57
APOBEC1P41238 AC108729.2-201ENST00000476543 840 ntBASIC5.24□□□□□ -1.57
APOBEC1P41238 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
APOBEC1P41238 RPL23AP73-201ENST00000492507 471 ntBASIC5.24□□□□□ -1.57
APOBEC1P41238 HMGB1P3-201ENST00000502802 616 ntBASIC5.24□□□□□ -1.57
APOBEC1P41238 MTCO1P31-201ENST00000506355 492 ntBASIC5.24□□□□□ -1.57
APOBEC1P41238 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.24□□□□□ -1.57
APOBEC1P41238 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.24□□□□□ -1.57
APOBEC1P41238 RNA5SP271-201ENST00000516700 88 ntBASIC5.24□□□□□ -1.57
APOBEC1P41238 AC103833.1-201ENST00000517442 172 ntBASIC5.24□□□□□ -1.57
APOBEC1P41238 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
APOBEC1P41238 VTA1P2-201ENST00000520205 911 ntBASIC5.24□□□□□ -1.57
APOBEC1P41238 AC113192.3-201ENST00000529152 742 ntBASIC5.24□□□□□ -1.57
APOBEC1P41238 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
APOBEC1P41238 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.24□□□□□ -1.57
APOBEC1P41238 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.24□□□□□ -1.57
APOBEC1P41238 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.24□□□□□ -1.57
APOBEC1P41238 AC126615.2-201ENST00000553003 515 ntBASIC5.24□□□□□ -1.57
APOBEC1P41238 AC233266.2-201ENST00000567067 528 ntBASIC5.24□□□□□ -1.57
APOBEC1P41238 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.24□□□□□ -1.57
APOBEC1P41238 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.24□□□□□ -1.57
APOBEC1P41238 AC005242.1-201ENST00000585658 438 ntBASIC5.24□□□□□ -1.57
APOBEC1P41238 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.24□□□□□ -1.57
APOBEC1P41238 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.24□□□□□ -1.57
APOBEC1P41238 BNIP3P27-201ENST00000599991 412 ntBASIC5.24□□□□□ -1.57
APOBEC1P41238 AC005776.1-201ENST00000603164 290 ntBASIC5.24□□□□□ -1.57
APOBEC1P41238 AP004372.1-201ENST00000604842 844 ntBASIC5.24□□□□□ -1.57
APOBEC1P41238 AC105148.1-201ENST00000604961 409 ntBASIC5.24□□□□□ -1.57
APOBEC1P41238 AC015849.2-201ENST00000605738 409 ntBASIC5.24□□□□□ -1.57
APOBEC1P41238 AC093388.1-201ENST00000609166 430 ntBASIC5.24□□□□□ -1.57
APOBEC1P41238 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.24□□□□□ -1.57
APOBEC1P41238 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
APOBEC1P41238 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
APOBEC1P41238 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
APOBEC1P41238 OR8G3P-202ENST00000641572 1255 ntBASIC5.24□□□□□ -1.57
APOBEC1P41238 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
APOBEC1P41238 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
APOBEC1P41238 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
APOBEC1P41238 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.24□□□□□ -1.57
APOBEC1P41238 AL592429.1-201ENST00000403909 1473 ntBASIC5.24□□□□□ -1.57
APOBEC1P41238 AC116158.1-201ENST00000560231 2129 ntBASIC5.24□□□□□ -1.57
APOBEC1P41238 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
APOBEC1P41238 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
APOBEC1P41238 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.24□□□□□ -1.57
APOBEC1P41238 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
APOBEC1P41238 BCORP1-203ENST00000513194 5093 ntBASIC5.24□□□□□ -1.57
APOBEC1P41238 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
APOBEC1P41238 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
APOBEC1P41238 AL136520.1-201ENST00000600311 1322 ntBASIC5.23□□□□□ -1.57
APOBEC1P41238 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
APOBEC1P41238 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
APOBEC1P41238 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
APOBEC1P41238 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
APOBEC1P41238 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
APOBEC1P41238 MFSD8-219ENST00000641228 2559 ntBASIC5.23□□□□□ -1.57
APOBEC1P41238 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
APOBEC1P41238 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
APOBEC1P41238 NCOA4P2-201ENST00000340589 1813 ntBASIC5.23□□□□□ -1.57
APOBEC1P41238 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.23□□□□□ -1.57
APOBEC1P41238 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
APOBEC1P41238 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
APOBEC1P41238 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.23□□□□□ -1.57
APOBEC1P41238 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
APOBEC1P41238 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
APOBEC1P41238 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.23□□□□□ -1.57
APOBEC1P41238 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
APOBEC1P41238 TMSB4XP2-201ENST00000335179 210 ntBASIC5.23□□□□□ -1.57
APOBEC1P41238 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
APOBEC1P41238 RNU1-150P-201ENST00000362491 162 ntBASIC5.23□□□□□ -1.57
APOBEC1P41238 RNA5SP500-201ENST00000364486 119 ntBASIC5.23□□□□□ -1.57
APOBEC1P41238 MIR621-201ENST00000384919 96 ntBASIC5.23□□□□□ -1.57
APOBEC1P41238 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
APOBEC1P41238 RNU6-1176P-201ENST00000390955 107 ntBASIC5.23□□□□□ -1.57
APOBEC1P41238 GSTA12P-201ENST00000402398 508 ntBASIC5.23□□□□□ -1.57
APOBEC1P41238 RPS3AP2-201ENST00000407190 754 ntBASIC5.23□□□□□ -1.57
APOBEC1P41238 RANP4-201ENST00000413361 655 ntBASIC5.23□□□□□ -1.57
APOBEC1P41238 MRPL53P1-201ENST00000414323 319 ntBASIC5.23□□□□□ -1.57
APOBEC1P41238 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
APOBEC1P41238 AC013410.2-201ENST00000422627 201 ntBASIC5.23□□□□□ -1.57
APOBEC1P41238 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.23□□□□□ -1.57
APOBEC1P41238 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.23□□□□□ -1.57
APOBEC1P41238 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.23□□□□□ -1.57
APOBEC1P41238 PCBP2P1-201ENST00000437262 977 ntBASIC5.23□□□□□ -1.57
APOBEC1P41238 LDHAP2-201ENST00000437325 985 ntBASIC5.23□□□□□ -1.57
APOBEC1P41238 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
APOBEC1P41238 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.23□□□□□ -1.57
APOBEC1P41238 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.23□□□□□ -1.57
APOBEC1P41238 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
APOBEC1P41238 AC093166.4-201ENST00000457867 318 ntBASIC5.23□□□□□ -1.57
APOBEC1P41238 RPS23P2-201ENST00000463671 415 ntBASIC5.23□□□□□ -1.57
APOBEC1P41238 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
APOBEC1P41238 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.23□□□□□ -1.57
APOBEC1P41238 RN7SL570P-201ENST00000484405 292 ntBASIC5.23□□□□□ -1.57
APOBEC1P41238 AC090058.1-201ENST00000498788 435 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms