Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HOXC6P09630 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
HOXC6P09630 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.29□□□□□ -1.4
HOXC6P09630 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
HOXC6P09630 AC244453.4-201ENST00000419150 388 ntBASIC6.29□□□□□ -1.4
HOXC6P09630 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.29□□□□□ -1.4
HOXC6P09630 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.29□□□□□ -1.4
HOXC6P09630 RPS23P9-201ENST00000448848 438 ntBASIC6.29□□□□□ -1.4
HOXC6P09630 RN7SL860P-201ENST00000473738 223 ntBASIC6.29□□□□□ -1.4
HOXC6P09630 RPS18P6-201ENST00000476880 458 ntBASIC6.29□□□□□ -1.4
HOXC6P09630 OR52A4P-202ENST00000481634 799 ntBASIC6.29□□□□□ -1.4
HOXC6P09630 OR52A4P-203ENST00000498233 1014 ntBASIC6.29□□□□□ -1.4
HOXC6P09630 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.29□□□□□ -1.4
HOXC6P09630 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC6.29□□□□□ -1.4
HOXC6P09630 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC6.29□□□□□ -1.4
HOXC6P09630 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.29□□□□□ -1.4
HOXC6P09630 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.29□□□□□ -1.4
HOXC6P09630 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.29□□□□□ -1.4
HOXC6P09630 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.29□□□□□ -1.4
HOXC6P09630 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.29□□□□□ -1.4
HOXC6P09630 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC6.29□□□□□ -1.4
HOXC6P09630 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.29□□□□□ -1.4
HOXC6P09630 AL353684.1-201ENST00000622677 1120 ntBASIC6.29□□□□□ -1.4
HOXC6P09630 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.29□□□□□ -1.4
HOXC6P09630 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.29□□□□□ -1.4
HOXC6P09630 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HOXC6P09630 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HOXC6P09630 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HOXC6P09630 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HOXC6P09630 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC6P09630 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC6P09630 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
HOXC6P09630 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC6P09630 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
HOXC6P09630 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
HOXC6P09630 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC6P09630 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC6P09630 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.28□□□□□ -1.4
HOXC6P09630 AL121977.1-201ENST00000401636 979 ntBASIC6.28□□□□□ -1.4
HOXC6P09630 DUTP5-201ENST00000406790 469 ntBASIC6.28□□□□□ -1.4
HOXC6P09630 U3.36-201ENST00000408418 213 ntBASIC6.28□□□□□ -1.4
HOXC6P09630 RN7SKP279-201ENST00000411383 298 ntBASIC6.28□□□□□ -1.4
HOXC6P09630 AC013470.3-201ENST00000420252 1194 ntBASIC6.28□□□□□ -1.4
HOXC6P09630 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.28□□□□□ -1.4
HOXC6P09630 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.28□□□□□ -1.4
HOXC6P09630 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.28□□□□□ -1.4
HOXC6P09630 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.28□□□□□ -1.4
HOXC6P09630 AL596266.1-201ENST00000448132 400 ntBASIC6.28□□□□□ -1.4
HOXC6P09630 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC6P09630 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC6P09630 AC108043.1-201ENST00000512696 574 ntBASIC6.28□□□□□ -1.4
HOXC6P09630 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.28□□□□□ -1.4
HOXC6P09630 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.28□□□□□ -1.4
HOXC6P09630 RN7SKP248-201ENST00000516278 305 ntBASIC6.28□□□□□ -1.4
HOXC6P09630 AC078899.1-201ENST00000521432 1185 ntBASIC6.28□□□□□ -1.4
HOXC6P09630 HMGB1P40-201ENST00000525121 540 ntBASIC6.28□□□□□ -1.4
HOXC6P09630 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
HOXC6P09630 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.28□□□□□ -1.4
HOXC6P09630 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.28□□□□□ -1.4
HOXC6P09630 AC109583.2-201ENST00000617367 129 ntBASIC6.28□□□□□ -1.4
HOXC6P09630 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC6P09630 AC138627.1-204ENST00000641894 765 ntBASIC6.28□□□□□ -1.4
HOXC6P09630 AL731532.1-201ENST00000623972 4236 ntBASIC6.28□□□□□ -1.4
HOXC6P09630 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.28□□□□□ -1.4
HOXC6P09630 ZNF969P-201ENST00000510345 2341 ntBASIC6.28□□□□□ -1.4
HOXC6P09630 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC6P09630 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
HOXC6P09630 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC6P09630 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.28□□□□□ -1.4
HOXC6P09630 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.27□□□□□ -1.4
HOXC6P09630 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXC6P09630 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
HOXC6P09630 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXC6P09630 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.27□□□□□ -1.41
HOXC6P09630 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.27□□□□□ -1.41
HOXC6P09630 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXC6P09630 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXC6P09630 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXC6P09630 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.27□□□□□ -1.41
HOXC6P09630 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
HOXC6P09630 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXC6P09630 AL009179.1-201ENST00000406085 265 ntBASIC6.27□□□□□ -1.41
HOXC6P09630 RPS21P8-201ENST00000413365 247 ntBASIC6.27□□□□□ -1.41
HOXC6P09630 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.27□□□□□ -1.41
HOXC6P09630 AL139128.1-201ENST00000413921 941 ntBASIC6.27□□□□□ -1.41
HOXC6P09630 RPS26P38-201ENST00000414476 348 ntBASIC6.27□□□□□ -1.41
HOXC6P09630 AC007161.1-204ENST00000423039 460 ntBASIC6.27□□□□□ -1.41
HOXC6P09630 SRSF1P1-201ENST00000424058 520 ntBASIC6.27□□□□□ -1.41
HOXC6P09630 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC6.27□□□□□ -1.41
HOXC6P09630 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.27□□□□□ -1.41
HOXC6P09630 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6.27□□□□□ -1.41
HOXC6P09630 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.27□□□□□ -1.41
HOXC6P09630 RNU6-941P-201ENST00000516346 108 ntBASIC6.27□□□□□ -1.41
HOXC6P09630 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.27□□□□□ -1.41
HOXC6P09630 AC139697.1-201ENST00000548429 745 ntBASIC6.27□□□□□ -1.41
HOXC6P09630 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.27□□□□□ -1.41
HOXC6P09630 MIR4436B2-201ENST00000581415 91 ntBASIC6.27□□□□□ -1.41
HOXC6P09630 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC6.27□□□□□ -1.41
HOXC6P09630 MIR4436B1-201ENST00000583272 91 ntBASIC6.27□□□□□ -1.41
HOXC6P09630 AC069307.1-201ENST00000602820 447 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms