Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
HOXC4P09017 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
HOXC4P09017 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXC4P09017 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
HOXC4P09017 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
HOXC4P09017 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HOXC4P09017 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HOXC4P09017 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HOXC4P09017 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
HOXC4P09017 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
HOXC4P09017 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HOXC4P09017 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HOXC4P09017 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.4□□□□□ -1.54
HOXC4P09017 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
HOXC4P09017 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.4□□□□□ -1.54
HOXC4P09017 CYCSP6-201ENST00000434498 302 ntBASIC5.4□□□□□ -1.54
HOXC4P09017 IGBP1P3-201ENST00000447449 1000 ntBASIC5.4□□□□□ -1.54
HOXC4P09017 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.4□□□□□ -1.54
HOXC4P09017 RPS26P41-201ENST00000450370 284 ntBASIC5.4□□□□□ -1.54
HOXC4P09017 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.4□□□□□ -1.54
HOXC4P09017 PSAT1P4-201ENST00000466500 526 ntBASIC5.4□□□□□ -1.54
HOXC4P09017 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.4□□□□□ -1.54
HOXC4P09017 CDC42P3-201ENST00000518493 633 ntBASIC5.4□□□□□ -1.54
HOXC4P09017 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
HOXC4P09017 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.4□□□□□ -1.54
HOXC4P09017 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXC4P09017 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXC4P09017 AC010487.1-201ENST00000594408 1172 ntBASIC5.4□□□□□ -1.54
HOXC4P09017 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HOXC4P09017 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.4□□□□□ -1.54
HOXC4P09017 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.4□□□□□ -1.54
HOXC4P09017 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
HOXC4P09017 AC074101.1-201ENST00000637861 241 ntBASIC5.4□□□□□ -1.54
HOXC4P09017 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
HOXC4P09017 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.4□□□□□ -1.55
HOXC4P09017 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
HOXC4P09017 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HOXC4P09017 AC004158.1-201ENST00000564508 4319 ntBASIC5.4□□□□□ -1.55
HOXC4P09017 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
HOXC4P09017 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HOXC4P09017 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
HOXC4P09017 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HOXC4P09017 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC4P09017 AC016745.2-201ENST00000608834 3443 ntBASIC5.39□□□□□ -1.55
HOXC4P09017 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXC4P09017 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC4P09017 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC4P09017 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
HOXC4P09017 AC068870.3-201ENST00000625077 2536 ntBASIC5.39□□□□□ -1.55
HOXC4P09017 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC4P09017 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
HOXC4P09017 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
HOXC4P09017 MIR133B-201ENST00000362210 119 ntBASIC5.39□□□□□ -1.55
HOXC4P09017 MIR105-2-201ENST00000385083 81 ntBASIC5.39□□□□□ -1.55
HOXC4P09017 MIR223-201ENST00000385204 110 ntBASIC5.39□□□□□ -1.55
HOXC4P09017 RNU1-77P-201ENST00000390868 162 ntBASIC5.39□□□□□ -1.55
HOXC4P09017 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.39□□□□□ -1.55
HOXC4P09017 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.39□□□□□ -1.55
HOXC4P09017 AC093655.2-201ENST00000425735 631 ntBASIC5.39□□□□□ -1.55
HOXC4P09017 AL590399.2-201ENST00000427536 309 ntBASIC5.39□□□□□ -1.55
HOXC4P09017 RPL7P56-201ENST00000429441 717 ntBASIC5.39□□□□□ -1.55
HOXC4P09017 CNOT7P2-201ENST00000441051 832 ntBASIC5.39□□□□□ -1.55
HOXC4P09017 RPS11P7-201ENST00000442125 465 ntBASIC5.39□□□□□ -1.55
HOXC4P09017 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.39□□□□□ -1.55
HOXC4P09017 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.39□□□□□ -1.55
HOXC4P09017 GAPDHP25-201ENST00000447061 1001 ntBASIC5.39□□□□□ -1.55
HOXC4P09017 RN7SL172P-201ENST00000460535 303 ntBASIC5.39□□□□□ -1.55
HOXC4P09017 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXC4P09017 RN7SL799P-201ENST00000475891 298 ntBASIC5.39□□□□□ -1.55
HOXC4P09017 RN7SL727P-201ENST00000482164 296 ntBASIC5.39□□□□□ -1.55
HOXC4P09017 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXC4P09017 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.39□□□□□ -1.55
HOXC4P09017 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.39□□□□□ -1.55
HOXC4P09017 LDHBP3-201ENST00000514909 822 ntBASIC5.39□□□□□ -1.55
HOXC4P09017 AC004825.1-201ENST00000555068 586 ntBASIC5.39□□□□□ -1.55
HOXC4P09017 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC4P09017 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXC4P09017 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.39□□□□□ -1.55
HOXC4P09017 AC013244.1-201ENST00000604279 193 ntBASIC5.39□□□□□ -1.55
HOXC4P09017 RNA5SP439-201ENST00000617595 124 ntBASIC5.39□□□□□ -1.55
HOXC4P09017 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC4P09017 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXC4P09017 CASC19-260ENST00000641828 2001 ntBASIC5.39□□□□□ -1.55
HOXC4P09017 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
HOXC4P09017 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC4P09017 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
HOXC4P09017 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXC4P09017 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.39□□□□□ -1.55
HOXC4P09017 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC4P09017 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC4P09017 SAMM50P1-201ENST00000455403 1399 ntBASIC5.39□□□□□ -1.55
HOXC4P09017 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXC4P09017 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
HOXC4P09017 AC006484.1-201ENST00000435086 1884 ntBASIC5.39□□□□□ -1.55
HOXC4P09017 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC4P09017 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.38□□□□□ -1.55
HOXC4P09017 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.38□□□□□ -1.55
HOXC4P09017 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
HOXC4P09017 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC4P09017 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms