Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
UBE4BO95155 AC109309.2-201ENST00000612597 332 ntBASIC6.03□□□□□ -1.44
UBE4BO95155 MIR6886-201ENST00000619864 61 ntBASIC6.03□□□□□ -1.44
UBE4BO95155 AC009120.7-201ENST00000623452 780 ntBASIC6.03□□□□□ -1.44
UBE4BO95155 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.03□□□□□ -1.44
UBE4BO95155 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
UBE4BO95155 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
UBE4BO95155 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.03□□□□□ -1.44
UBE4BO95155 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.03□□□□□ -1.44
UBE4BO95155 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
UBE4BO95155 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
UBE4BO95155 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
UBE4BO95155 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
UBE4BO95155 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
UBE4BO95155 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.03□□□□□ -1.44
UBE4BO95155 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
UBE4BO95155 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
UBE4BO95155 AC083837.1-201ENST00000565297 2994 ntBASIC6.03□□□□□ -1.44
UBE4BO95155 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
UBE4BO95155 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
UBE4BO95155 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
UBE4BO95155 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
UBE4BO95155 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
UBE4BO95155 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
UBE4BO95155 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
UBE4BO95155 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
UBE4BO95155 TMSB4XP4-201ENST00000323496 618 ntBASIC6.02□□□□□ -1.45
UBE4BO95155 MIR323A-201ENST00000362199 86 ntBASIC6.02□□□□□ -1.45
UBE4BO95155 RN7SKP81-201ENST00000365603 331 ntBASIC6.02□□□□□ -1.45
UBE4BO95155 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
UBE4BO95155 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.02□□□□□ -1.45
UBE4BO95155 AL161636.2-201ENST00000445179 927 ntBASIC6.02□□□□□ -1.45
UBE4BO95155 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
UBE4BO95155 AL672138.1-201ENST00000450604 1015 ntBASIC6.02□□□□□ -1.45
UBE4BO95155 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC6.02□□□□□ -1.45
UBE4BO95155 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC6.02□□□□□ -1.45
UBE4BO95155 MTND6P2-201ENST00000512226 524 ntBASIC6.02□□□□□ -1.45
UBE4BO95155 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.02□□□□□ -1.45
UBE4BO95155 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC6.02□□□□□ -1.45
UBE4BO95155 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.02□□□□□ -1.45
UBE4BO95155 AL162574.1-201ENST00000615702 950 ntBASIC6.02□□□□□ -1.45
UBE4BO95155 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.02□□□□□ -1.45
UBE4BO95155 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.02□□□□□ -1.45
UBE4BO95155 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
UBE4BO95155 SAMM50P1-201ENST00000455403 1399 ntBASIC6.02□□□□□ -1.45
UBE4BO95155 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.02□□□□□ -1.45
UBE4BO95155 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
UBE4BO95155 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
UBE4BO95155 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
UBE4BO95155 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.02□□□□□ -1.45
UBE4BO95155 AC144833.1-201ENST00000567953 4089 ntBASIC6.02□□□□□ -1.45
UBE4BO95155 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.02□□□□□ -1.45
UBE4BO95155 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
UBE4BO95155 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
UBE4BO95155 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
UBE4BO95155 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
UBE4BO95155 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.02□□□□□ -1.45
UBE4BO95155 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
UBE4BO95155 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.02□□□□□ -1.45
UBE4BO95155 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
UBE4BO95155 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
UBE4BO95155 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
UBE4BO95155 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.01□□□□□ -1.45
UBE4BO95155 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
UBE4BO95155 DBIP1-201ENST00000401435 260 ntBASIC6.01□□□□□ -1.45
UBE4BO95155 AL391422.1-201ENST00000402155 436 ntBASIC6.01□□□□□ -1.45
UBE4BO95155 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.01□□□□□ -1.45
UBE4BO95155 PRUNEP1-201ENST00000425846 705 ntBASIC6.01□□□□□ -1.45
UBE4BO95155 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.01□□□□□ -1.45
UBE4BO95155 NPM1P48-201ENST00000436002 853 ntBASIC6.01□□□□□ -1.45
UBE4BO95155 AP000281.1-201ENST00000444036 316 ntBASIC6.01□□□□□ -1.45
UBE4BO95155 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.01□□□□□ -1.45
UBE4BO95155 RPL36AP39-201ENST00000445859 318 ntBASIC6.01□□□□□ -1.45
UBE4BO95155 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.01□□□□□ -1.45
UBE4BO95155 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.01□□□□□ -1.45
UBE4BO95155 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.01□□□□□ -1.45
UBE4BO95155 AP000797.2-201ENST00000475768 606 ntBASIC6.01□□□□□ -1.45
UBE4BO95155 RN7SL273P-201ENST00000481561 299 ntBASIC6.01□□□□□ -1.45
UBE4BO95155 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.01□□□□□ -1.45
UBE4BO95155 RN7SL101P-201ENST00000496350 279 ntBASIC6.01□□□□□ -1.45
UBE4BO95155 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC6.01□□□□□ -1.45
UBE4BO95155 EIF4EP5-201ENST00000528228 640 ntBASIC6.01□□□□□ -1.45
UBE4BO95155 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.01□□□□□ -1.45
UBE4BO95155 AC015720.2-201ENST00000567709 334 ntBASIC6.01□□□□□ -1.45
UBE4BO95155 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.01□□□□□ -1.45
UBE4BO95155 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC6.01□□□□□ -1.45
UBE4BO95155 RNA5SP439-201ENST00000617595 124 ntBASIC6.01□□□□□ -1.45
UBE4BO95155 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
UBE4BO95155 AC073869.8-201ENST00000641806 335 ntBASIC6.01□□□□□ -1.45
UBE4BO95155 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
UBE4BO95155 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
UBE4BO95155 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.01□□□□□ -1.45
UBE4BO95155 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
UBE4BO95155 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
UBE4BO95155 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.01□□□□□ -1.45
UBE4BO95155 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
UBE4BO95155 ICE2P1-201ENST00000512800 1849 ntBASIC6.01□□□□□ -1.45
UBE4BO95155 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
UBE4BO95155 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
UBE4BO95155 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms