Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx6-1Q99MA9 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Nkx6-1Q99MA9 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx6-1Q99MA9 Rprl3-201ENSMUST00000157400 290 ntBASIC15.76■□□□□ 0.11
Nkx6-1Q99MA9 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.76■□□□□ 0.11
Nkx6-1Q99MA9 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
Nkx6-1Q99MA9 Gm27867-201ENSMUST00000184778 125 ntBASIC15.76■□□□□ 0.11
Nkx6-1Q99MA9 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.76■□□□□ 0.11
Nkx6-1Q99MA9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx6-1Q99MA9 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx6-1Q99MA9 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx6-1Q99MA9 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx6-1Q99MA9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Nkx6-1Q99MA9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.76■□□□□ 0.11
Nkx6-1Q99MA9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx6-1Q99MA9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx6-1Q99MA9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx6-1Q99MA9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.76■□□□□ 0.11
Nkx6-1Q99MA9 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx6-1Q99MA9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx6-1Q99MA9 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.76■□□□□ 0.11
Nkx6-1Q99MA9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx6-1Q99MA9 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx6-1Q99MA9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx6-1Q99MA9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Nkx6-1Q99MA9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx6-1Q99MA9 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.75■□□□□ 0.11
Nkx6-1Q99MA9 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.75■□□□□ 0.11
Nkx6-1Q99MA9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx6-1Q99MA9 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.75■□□□□ 0.11
Nkx6-1Q99MA9 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx6-1Q99MA9 Gm5364-201ENSMUST00000216789 889 ntBASIC15.75■□□□□ 0.11
Nkx6-1Q99MA9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx6-1Q99MA9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx6-1Q99MA9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx6-1Q99MA9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx6-1Q99MA9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx6-1Q99MA9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx6-1Q99MA9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx6-1Q99MA9 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.75■□□□□ 0.11
Nkx6-1Q99MA9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx6-1Q99MA9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx6-1Q99MA9 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx6-1Q99MA9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.74■□□□□ 0.11
Nkx6-1Q99MA9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx6-1Q99MA9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx6-1Q99MA9 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx6-1Q99MA9 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx6-1Q99MA9 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx6-1Q99MA9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.74■□□□□ 0.11
Nkx6-1Q99MA9 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx6-1Q99MA9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx6-1Q99MA9 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx6-1Q99MA9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx6-1Q99MA9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx6-1Q99MA9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Nkx6-1Q99MA9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx6-1Q99MA9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx6-1Q99MA9 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Nkx6-1Q99MA9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx6-1Q99MA9 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.74■□□□□ 0.11
Nkx6-1Q99MA9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Nkx6-1Q99MA9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx6-1Q99MA9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx6-1Q99MA9 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx6-1Q99MA9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx6-1Q99MA9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx6-1Q99MA9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx6-1Q99MA9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx6-1Q99MA9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx6-1Q99MA9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Nkx6-1Q99MA9 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Nkx6-1Q99MA9 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx6-1Q99MA9 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.73■□□□□ 0.11
Nkx6-1Q99MA9 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.73■□□□□ 0.11
Nkx6-1Q99MA9 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx6-1Q99MA9 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx6-1Q99MA9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx6-1Q99MA9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx6-1Q99MA9 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.73■□□□□ 0.11
Nkx6-1Q99MA9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx6-1Q99MA9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx6-1Q99MA9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx6-1Q99MA9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx6-1Q99MA9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx6-1Q99MA9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx6-1Q99MA9 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Nkx6-1Q99MA9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.73■□□□□ 0.11
Nkx6-1Q99MA9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx6-1Q99MA9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx6-1Q99MA9 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Nkx6-1Q99MA9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.72■□□□□ 0.11
Nkx6-1Q99MA9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx6-1Q99MA9 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.72■□□□□ 0.11
Nkx6-1Q99MA9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx6-1Q99MA9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx6-1Q99MA9 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx6-1Q99MA9 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx6-1Q99MA9 Gm13312-201ENSMUST00000119631 718 ntBASIC15.72■□□□□ 0.11
Nkx6-1Q99MA9 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms