Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
NEK1Q96PY6 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NEK1Q96PY6 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NEK1Q96PY6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC23.24■■□□□ 1.31
NEK1Q96PY6 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC23.24■■□□□ 1.31
NEK1Q96PY6 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NEK1Q96PY6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NEK1Q96PY6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
NEK1Q96PY6 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
NEK1Q96PY6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
NEK1Q96PY6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NEK1Q96PY6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
NEK1Q96PY6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC23.23■■□□□ 1.31
NEK1Q96PY6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
NEK1Q96PY6 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
NEK1Q96PY6 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
NEK1Q96PY6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
NEK1Q96PY6 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
NEK1Q96PY6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NEK1Q96PY6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC23.23■■□□□ 1.31
NEK1Q96PY6 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC23.23■■□□□ 1.31
NEK1Q96PY6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
NEK1Q96PY6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
NEK1Q96PY6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NEK1Q96PY6 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NEK1Q96PY6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
NEK1Q96PY6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NEK1Q96PY6 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
NEK1Q96PY6 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
NEK1Q96PY6 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NEK1Q96PY6 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
NEK1Q96PY6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC23.22■■□□□ 1.31
NEK1Q96PY6 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
NEK1Q96PY6 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC23.22■■□□□ 1.31
NEK1Q96PY6 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC23.22■■□□□ 1.31
NEK1Q96PY6 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NEK1Q96PY6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC23.22■■□□□ 1.31
NEK1Q96PY6 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NEK1Q96PY6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
NEK1Q96PY6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC23.22■■□□□ 1.31
NEK1Q96PY6 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
NEK1Q96PY6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
NEK1Q96PY6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
NEK1Q96PY6 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NEK1Q96PY6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
NEK1Q96PY6 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NEK1Q96PY6 AP006587.1-201ENST00000534129 1502 ntBASIC23.22■■□□□ 1.31
NEK1Q96PY6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
NEK1Q96PY6 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC23.22■■□□□ 1.31
NEK1Q96PY6 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
NEK1Q96PY6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
NEK1Q96PY6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NEK1Q96PY6 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
NEK1Q96PY6 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC23.22■■□□□ 1.31
NEK1Q96PY6 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC23.22■■□□□ 1.31
NEK1Q96PY6 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC23.22■■□□□ 1.31
NEK1Q96PY6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
NEK1Q96PY6 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NEK1Q96PY6 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC23.21■■□□□ 1.31
NEK1Q96PY6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
NEK1Q96PY6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NEK1Q96PY6 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC23.21■■□□□ 1.31
NEK1Q96PY6 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NEK1Q96PY6 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC23.21■■□□□ 1.31
NEK1Q96PY6 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC23.21■■□□□ 1.31
NEK1Q96PY6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC23.21■■□□□ 1.31
NEK1Q96PY6 AP003097.1-201ENST00000530657 1135 ntBASIC23.21■■□□□ 1.31
NEK1Q96PY6 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NEK1Q96PY6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC23.21■■□□□ 1.31
NEK1Q96PY6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC23.21■■□□□ 1.31
NEK1Q96PY6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NEK1Q96PY6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NEK1Q96PY6 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NEK1Q96PY6 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
NEK1Q96PY6 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC23.21■■□□□ 1.31
NEK1Q96PY6 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NEK1Q96PY6 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
NEK1Q96PY6 TP73-202ENST00000354437 2140 ntTSL 5 BASIC23.21■■□□□ 1.31
NEK1Q96PY6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
NEK1Q96PY6 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NEK1Q96PY6 AC007952.6-201ENST00000573168 2673 ntBASIC23.21■■□□□ 1.31
NEK1Q96PY6 AC003957.1-201ENST00000625108 2673 ntBASIC23.21■■□□□ 1.31
NEK1Q96PY6 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NEK1Q96PY6 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NEK1Q96PY6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
NEK1Q96PY6 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NEK1Q96PY6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC23.2■■□□□ 1.3
NEK1Q96PY6 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC23.2■■□□□ 1.3
NEK1Q96PY6 GOLGA6L3-201ENST00000507199 1679 ntBASIC23.2■■□□□ 1.3
NEK1Q96PY6 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NEK1Q96PY6 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
NEK1Q96PY6 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NEK1Q96PY6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NEK1Q96PY6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
NEK1Q96PY6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NEK1Q96PY6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC23.2■■□□□ 1.3
NEK1Q96PY6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC23.2■■□□□ 1.3
NEK1Q96PY6 TBCB-214ENST00000629269 413 ntTSL 5 BASIC23.2■■□□□ 1.3
NEK1Q96PY6 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NEK1Q96PY6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms