Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC12.17□□□□□ -0.46
VPS13BQ7Z7G8 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13BQ7Z7G8 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13BQ7Z7G8 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC12.17□□□□□ -0.46
VPS13BQ7Z7G8 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13BQ7Z7G8 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13BQ7Z7G8 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13BQ7Z7G8 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13BQ7Z7G8 HIST1H2APS4-201ENST00000362070 348 ntBASIC12.17□□□□□ -0.46
VPS13BQ7Z7G8 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13BQ7Z7G8 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC12.17□□□□□ -0.46
VPS13BQ7Z7G8 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13BQ7Z7G8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13BQ7Z7G8 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC12.17□□□□□ -0.46
VPS13BQ7Z7G8 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13BQ7Z7G8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13BQ7Z7G8 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC12.17□□□□□ -0.46
VPS13BQ7Z7G8 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
VPS13BQ7Z7G8 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC12.17□□□□□ -0.46
VPS13BQ7Z7G8 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC12.17□□□□□ -0.46
VPS13BQ7Z7G8 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC12.17□□□□□ -0.46
VPS13BQ7Z7G8 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC12.17□□□□□ -0.46
VPS13BQ7Z7G8 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13BQ7Z7G8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13BQ7Z7G8 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 FXN-203ENST00000396366 922 ntTSL 2 BASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 TSPY21P-201ENST00000433481 731 ntBASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 TSPY23P-201ENST00000440136 739 ntBASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 AC083849.1-201ENST00000615227 514 ntBASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 ECEL1P1-201ENST00000373592 1742 ntBASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 AP000692.2-201ENST00000608391 879 ntBASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 MFAP1P1-201ENST00000442257 1255 ntBASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
VPS13BQ7Z7G8 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13BQ7Z7G8 AL845331.1-201ENST00000424978 1190 ntBASIC12.15□□□□□ -0.46
VPS13BQ7Z7G8 SLC25A1P2-201ENST00000430693 912 ntBASIC12.15□□□□□ -0.46
VPS13BQ7Z7G8 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
VPS13BQ7Z7G8 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC12.15□□□□□ -0.46
VPS13BQ7Z7G8 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13BQ7Z7G8 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13BQ7Z7G8 AC092338.2-201ENST00000568827 1415 ntBASIC12.15□□□□□ -0.46
VPS13BQ7Z7G8 DPP3P2-201ENST00000416030 1696 ntBASIC12.15□□□□□ -0.46
VPS13BQ7Z7G8 AC018553.1-201ENST00000616682 1458 ntBASIC12.15□□□□□ -0.46
VPS13BQ7Z7G8 SMG8-203ENST00000578922 2178 ntBASIC12.15□□□□□ -0.46
VPS13BQ7Z7G8 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13BQ7Z7G8 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13BQ7Z7G8 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13BQ7Z7G8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC12.15□□□□□ -0.46
VPS13BQ7Z7G8 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13BQ7Z7G8 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13BQ7Z7G8 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
VPS13BQ7Z7G8 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
VPS13BQ7Z7G8 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
VPS13BQ7Z7G8 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13BQ7Z7G8 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13BQ7Z7G8 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13BQ7Z7G8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13BQ7Z7G8 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13BQ7Z7G8 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC12.15□□□□□ -0.46
VPS13BQ7Z7G8 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC12.15□□□□□ -0.46
VPS13BQ7Z7G8 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13BQ7Z7G8 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC12.15□□□□□ -0.46
VPS13BQ7Z7G8 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13BQ7Z7G8 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
VPS13BQ7Z7G8 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC12.15□□□□□ -0.46
VPS13BQ7Z7G8 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC12.15□□□□□ -0.46
VPS13BQ7Z7G8 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.46
VPS13BQ7Z7G8 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC12.15□□□□□ -0.46
VPS13BQ7Z7G8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms