Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Matn3O35701 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Matn3O35701 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Matn3O35701 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.37■□□□□ 0.05
Matn3O35701 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Matn3O35701 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Matn3O35701 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.36■□□□□ 0.05
Matn3O35701 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Matn3O35701 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Matn3O35701 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
Matn3O35701 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Matn3O35701 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Matn3O35701 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Matn3O35701 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Matn3O35701 Reep4-203ENSMUST00000226563 1444 ntBASIC15.36■□□□□ 0.05
Matn3O35701 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Matn3O35701 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.36■□□□□ 0.05
Matn3O35701 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Matn3O35701 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.36■□□□□ 0.05
Matn3O35701 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Matn3O35701 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Matn3O35701 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.36■□□□□ 0.05
Matn3O35701 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Matn3O35701 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Matn3O35701 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.36■□□□□ 0.05
Matn3O35701 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Matn3O35701 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Matn3O35701 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Matn3O35701 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Matn3O35701 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Matn3O35701 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Matn3O35701 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.36■□□□□ 0.05
Matn3O35701 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Matn3O35701 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
Matn3O35701 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Matn3O35701 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Matn3O35701 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Matn3O35701 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.36■□□□□ 0.05
Matn3O35701 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Matn3O35701 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Matn3O35701 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Matn3O35701 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Matn3O35701 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Matn3O35701 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Matn3O35701 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.35■□□□□ 0.05
Matn3O35701 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Matn3O35701 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Matn3O35701 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Matn3O35701 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Matn3O35701 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Matn3O35701 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Matn3O35701 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Matn3O35701 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.35■□□□□ 0.05
Matn3O35701 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.35■□□□□ 0.05
Matn3O35701 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.35■□□□□ 0.05
Matn3O35701 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Matn3O35701 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Matn3O35701 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Matn3O35701 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Matn3O35701 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Matn3O35701 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.35■□□□□ 0.05
Matn3O35701 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Matn3O35701 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Matn3O35701 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Matn3O35701 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Matn3O35701 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Matn3O35701 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Matn3O35701 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Matn3O35701 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Matn3O35701 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Matn3O35701 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Matn3O35701 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Matn3O35701 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.34■□□□□ 0.05
Matn3O35701 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Matn3O35701 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Matn3O35701 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Matn3O35701 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Matn3O35701 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.34■□□□□ 0.05
Matn3O35701 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Matn3O35701 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Matn3O35701 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Matn3O35701 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Matn3O35701 Gm9988-201ENSMUST00000069786 435 ntBASIC15.34■□□□□ 0.05
Matn3O35701 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Matn3O35701 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Matn3O35701 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.34■□□□□ 0.05
Matn3O35701 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Matn3O35701 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Matn3O35701 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Matn3O35701 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Matn3O35701 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Matn3O35701 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Matn3O35701 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Matn3O35701 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Matn3O35701 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Matn3O35701 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.33■□□□□ 0.05
Matn3O35701 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Matn3O35701 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Matn3O35701 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
Matn3O35701 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.33■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms