Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC005042.1-201ENST00000393397 800 ntBASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 AL009179.1-201ENST00000406085 265 ntBASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 MIR1178-201ENST00000408396 91 ntBASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 AC021876.1-201ENST00000425959 359 ntBASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 CYCSP12-201ENST00000437729 300 ntBASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 NANOGP9-201ENST00000439890 892 ntBASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 NPM1P19-201ENST00000450070 712 ntBASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 ATP5LP5-201ENST00000483050 299 ntBASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 OR7E18P-201ENST00000592589 702 ntBASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 AC000068.2-201ENST00000608816 460 ntBASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 AC004808.2-201ENST00000627965 773 ntBASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 MT-RNR2-201ENST00000387347 1559 ntBASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 OR9K1P-201ENST00000326513 941 ntBASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 RNA5SP183-201ENST00000362452 119 ntBASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 AC096921.1-201ENST00000411661 375 ntBASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 AC007161.1-204ENST00000423039 460 ntBASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 AC092651.1-201ENST00000426110 312 ntBASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 AC013410.1-201ENST00000436223 1232 ntBASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 AL163193.1-201ENST00000444895 788 ntBASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 RPL7P45-201ENST00000455851 743 ntBASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 OR2AO1P-201ENST00000476497 403 ntBASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 AC090142.2-201ENST00000483263 416 ntBASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 RN7SKP253-201ENST00000516424 309 ntBASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 RNA5SP34-201ENST00000516887 130 ntBASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 AC078878.1-201ENST00000539832 958 ntBASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 AC137627.1-201ENST00000545761 289 ntBASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 MIR6837-201ENST00000620884 64 ntBASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 AP000550.3-201ENST00000637734 379 ntBASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 AC140134.1-201ENST00000511830 3544 ntBASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 AC235565.1-201ENST00000456962 1325 ntBASIC4.94□□□□□ -1.62
CLCF1Q9UBD9 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLCF1Q9UBD9 GVINP1-202ENST00000531871 7271 ntBASIC4.93□□□□□ -1.62
CLCF1Q9UBD9 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.93□□□□□ -1.62
CLCF1Q9UBD9 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLCF1Q9UBD9 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.93□□□□□ -1.62
CLCF1Q9UBD9 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLCF1Q9UBD9 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLCF1Q9UBD9 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLCF1Q9UBD9 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLCF1Q9UBD9 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC4.93□□□□□ -1.62
CLCF1Q9UBD9 AL121886.1-201ENST00000358609 435 ntBASIC4.93□□□□□ -1.62
CLCF1Q9UBD9 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLCF1Q9UBD9 RNU6-171P-201ENST00000384354 107 ntBASIC4.93□□□□□ -1.62
CLCF1Q9UBD9 RNU11-201ENST00000387069 134 ntBASIC4.93□□□□□ -1.62
CLCF1Q9UBD9 NPM1P37-201ENST00000403105 874 ntBASIC4.93□□□□□ -1.62
CLCF1Q9UBD9 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLCF1Q9UBD9 MIR1286-201ENST00000408112 78 ntBASIC4.93□□□□□ -1.62
CLCF1Q9UBD9 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.93□□□□□ -1.62
CLCF1Q9UBD9 AP000534.2-201ENST00000412729 568 ntBASIC4.93□□□□□ -1.62
CLCF1Q9UBD9 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLCF1Q9UBD9 BMS1P13-201ENST00000417301 885 ntBASIC4.93□□□□□ -1.62
CLCF1Q9UBD9 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms