Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.63□□□□□ -1.51
BRF2Q9HAW0 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.63□□□□□ -1.51
BRF2Q9HAW0 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.63□□□□□ -1.51
BRF2Q9HAW0 FBXL21-201ENST00000297158 1305 ntBASIC5.63□□□□□ -1.51
BRF2Q9HAW0 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
BRF2Q9HAW0 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
BRF2Q9HAW0 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
BRF2Q9HAW0 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
BRF2Q9HAW0 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.63□□□□□ -1.51
BRF2Q9HAW0 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.63□□□□□ -1.51
BRF2Q9HAW0 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
BRF2Q9HAW0 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
BRF2Q9HAW0 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
BRF2Q9HAW0 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
BRF2Q9HAW0 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
BRF2Q9HAW0 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 AC009962.1-201ENST00000567327 3813 ntBASIC5.62□□□□□ -1.51
BRF2Q9HAW0 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.62□□□□□ -1.51
BRF2Q9HAW0 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 RN7SKP78-201ENST00000364711 318 ntBASIC5.62□□□□□ -1.51
BRF2Q9HAW0 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 VN1R21P-201ENST00000426703 765 ntBASIC5.62□□□□□ -1.51
BRF2Q9HAW0 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 AC023141.8-201ENST00000442554 208 ntBASIC5.62□□□□□ -1.51
BRF2Q9HAW0 SEPT7P3-201ENST00000455017 621 ntBASIC5.62□□□□□ -1.51
BRF2Q9HAW0 HSPE1P22-201ENST00000456856 327 ntBASIC5.62□□□□□ -1.51
BRF2Q9HAW0 MTND2P39-201ENST00000457230 764 ntBASIC5.62□□□□□ -1.51
BRF2Q9HAW0 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.62□□□□□ -1.51
BRF2Q9HAW0 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 AL158068.1-201ENST00000506116 616 ntBASIC5.62□□□□□ -1.51
BRF2Q9HAW0 ASNSP4-201ENST00000511103 447 ntBASIC5.62□□□□□ -1.51
BRF2Q9HAW0 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 HSD3BP3-201ENST00000514706 994 ntBASIC5.62□□□□□ -1.51
BRF2Q9HAW0 AC027338.1-201ENST00000514840 825 ntBASIC5.62□□□□□ -1.51
BRF2Q9HAW0 RN7SKP35-201ENST00000517210 151 ntBASIC5.62□□□□□ -1.51
BRF2Q9HAW0 IGKV2-19-201ENST00000518132 283 ntBASIC5.62□□□□□ -1.51
BRF2Q9HAW0 IGKV3D-25-201ENST00000519599 235 ntBASIC5.62□□□□□ -1.51
BRF2Q9HAW0 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 MIR4502-201ENST00000580432 81 ntBASIC5.62□□□□□ -1.51
BRF2Q9HAW0 AC004775.1-201ENST00000607389 753 ntBASIC5.62□□□□□ -1.51
BRF2Q9HAW0 AP001437.1-201ENST00000608783 456 ntBASIC5.62□□□□□ -1.51
BRF2Q9HAW0 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.62□□□□□ -1.51
BRF2Q9HAW0 AL445493.3-201ENST00000619568 477 ntBASIC5.62□□□□□ -1.51
BRF2Q9HAW0 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 AC000095.2-202ENST00000637415 154 ntBASIC5.62□□□□□ -1.51
BRF2Q9HAW0 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 AC007382.1-201ENST00000624376 2618 ntBASIC5.62□□□□□ -1.51
BRF2Q9HAW0 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 AC232271.1-201ENST00000602455 2715 ntBASIC5.62□□□□□ -1.51
BRF2Q9HAW0 AL354854.1-201ENST00000455940 1363 ntBASIC5.62□□□□□ -1.51
BRF2Q9HAW0 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 MTCO1P15-201ENST00000529569 1526 ntBASIC5.62□□□□□ -1.51
BRF2Q9HAW0 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
BRF2Q9HAW0 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms