Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
SCAPERQ9BY12 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC8.19□□□□□ -1.1
SCAPERQ9BY12 RHOT1P3-201ENST00000436571 331 ntBASIC8.19□□□□□ -1.1
SCAPERQ9BY12 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC8.19□□□□□ -1.1
SCAPERQ9BY12 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC8.19□□□□□ -1.1
SCAPERQ9BY12 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC8.19□□□□□ -1.1
SCAPERQ9BY12 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC8.19□□□□□ -1.1
SCAPERQ9BY12 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
SCAPERQ9BY12 RN7SKP253-201ENST00000516424 309 ntBASIC8.19□□□□□ -1.1
SCAPERQ9BY12 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
SCAPERQ9BY12 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC8.19□□□□□ -1.1
SCAPERQ9BY12 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC8.19□□□□□ -1.1
SCAPERQ9BY12 AC005341.1-201ENST00000571086 708 ntBASIC8.19□□□□□ -1.1
SCAPERQ9BY12 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC8.19□□□□□ -1.1
SCAPERQ9BY12 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC8.19□□□□□ -1.1
SCAPERQ9BY12 AL513327.3-201ENST00000602618 469 ntBASIC8.19□□□□□ -1.1
SCAPERQ9BY12 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC8.19□□□□□ -1.1
SCAPERQ9BY12 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SCAPERQ9BY12 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SCAPERQ9BY12 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC8.19□□□□□ -1.1
SCAPERQ9BY12 AC068769.1-201ENST00000474767 2426 ntBASIC8.19□□□□□ -1.1
SCAPERQ9BY12 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
SCAPERQ9BY12 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC8.18□□□□□ -1.1
SCAPERQ9BY12 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SCAPERQ9BY12 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SCAPERQ9BY12 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
SCAPERQ9BY12 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
SCAPERQ9BY12 AC013268.3-201ENST00000262716 2324 ntBASIC8.18□□□□□ -1.1
SCAPERQ9BY12 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SCAPERQ9BY12 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SCAPERQ9BY12 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
SCAPERQ9BY12 OR2AM1P-201ENST00000422137 422 ntBASIC8.18□□□□□ -1.1
SCAPERQ9BY12 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC8.18□□□□□ -1.1
SCAPERQ9BY12 MGAT2P2-201ENST00000427194 797 ntBASIC8.18□□□□□ -1.1
SCAPERQ9BY12 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC8.18□□□□□ -1.1
SCAPERQ9BY12 AC092905.1-201ENST00000467527 949 ntBASIC8.18□□□□□ -1.1
SCAPERQ9BY12 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC8.18□□□□□ -1.1
SCAPERQ9BY12 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC8.18□□□□□ -1.1
SCAPERQ9BY12 AC009117.1-201ENST00000563948 554 ntBASIC8.18□□□□□ -1.1
SCAPERQ9BY12 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC8.18□□□□□ -1.1
SCAPERQ9BY12 AL023583.1-201ENST00000607518 1143 ntBASIC8.18□□□□□ -1.1
SCAPERQ9BY12 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC8.18□□□□□ -1.1
SCAPERQ9BY12 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC8.18□□□□□ -1.1
SCAPERQ9BY12 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
SCAPERQ9BY12 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC8.18□□□□□ -1.1
SCAPERQ9BY12 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SCAPERQ9BY12 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
SCAPERQ9BY12 LCOR-201ENST00000286067 4542 ntBASIC8.18□□□□□ -1.1
SCAPERQ9BY12 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SCAPERQ9BY12 NLRP3P1-201ENST00000622303 1785 ntBASIC8.18□□□□□ -1.1
SCAPERQ9BY12 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SCAPERQ9BY12 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SCAPERQ9BY12 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SCAPERQ9BY12 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SCAPERQ9BY12 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SCAPERQ9BY12 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SCAPERQ9BY12 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SCAPERQ9BY12 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
SCAPERQ9BY12 RNU6-398P-201ENST00000384143 109 ntBASIC8.17□□□□□ -1.1
SCAPERQ9BY12 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SCAPERQ9BY12 AC019050.1-201ENST00000418508 492 ntBASIC8.17□□□□□ -1.1
SCAPERQ9BY12 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
SCAPERQ9BY12 C4BPAP2-201ENST00000428434 478 ntBASIC8.17□□□□□ -1.1
SCAPERQ9BY12 AC073072.2-201ENST00000447425 348 ntBASIC8.17□□□□□ -1.1
SCAPERQ9BY12 AC097484.1-201ENST00000471148 389 ntBASIC8.17□□□□□ -1.1
SCAPERQ9BY12 ST13P12-201ENST00000508958 1094 ntBASIC8.17□□□□□ -1.1
SCAPERQ9BY12 OR7H2P-201ENST00000513483 306 ntBASIC8.17□□□□□ -1.1
SCAPERQ9BY12 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC8.17□□□□□ -1.1
SCAPERQ9BY12 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC8.17□□□□□ -1.1
SCAPERQ9BY12 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC8.17□□□□□ -1.1
SCAPERQ9BY12 HIRAP1-201ENST00000605318 787 ntBASIC8.17□□□□□ -1.1
SCAPERQ9BY12 AL627230.1-201ENST00000613077 211 ntBASIC8.17□□□□□ -1.1
SCAPERQ9BY12 AL591926.8-201ENST00000616876 211 ntBASIC8.17□□□□□ -1.1
SCAPERQ9BY12 AC015660.5-201ENST00000623238 564 ntBASIC8.17□□□□□ -1.1
SCAPERQ9BY12 MVP-219ENST00000629059 120 ntTSL 5 BASIC8.17□□□□□ -1.1
SCAPERQ9BY12 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SCAPERQ9BY12 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SCAPERQ9BY12 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SCAPERQ9BY12 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SCAPERQ9BY12 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
SCAPERQ9BY12 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SCAPERQ9BY12 AL078621.3-201ENST00000623707 2042 ntBASIC8.16□□□□□ -1.1
SCAPERQ9BY12 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC8.16□□□□□ -1.1
SCAPERQ9BY12 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
SCAPERQ9BY12 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
SCAPERQ9BY12 SNORA70.9-201ENST00000384370 135 ntBASIC8.16□□□□□ -1.1
SCAPERQ9BY12 RPS4XP9-201ENST00000405151 780 ntBASIC8.16□□□□□ -1.1
SCAPERQ9BY12 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SCAPERQ9BY12 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC8.16□□□□□ -1.1
SCAPERQ9BY12 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC8.16□□□□□ -1.1
SCAPERQ9BY12 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC8.16□□□□□ -1.1
SCAPERQ9BY12 AC016712.1-201ENST00000431088 378 ntBASIC8.16□□□□□ -1.1
SCAPERQ9BY12 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC8.16□□□□□ -1.1
SCAPERQ9BY12 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC8.16□□□□□ -1.1
SCAPERQ9BY12 AC104634.1-201ENST00000452720 462 ntBASIC8.16□□□□□ -1.1
SCAPERQ9BY12 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC8.16□□□□□ -1.1
SCAPERQ9BY12 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC8.16□□□□□ -1.1
SCAPERQ9BY12 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC8.16□□□□□ -1.1
SCAPERQ9BY12 C1GALT1P3-201ENST00000522049 819 ntBASIC8.16□□□□□ -1.1
SCAPERQ9BY12 MIR4691-201ENST00000583764 85 ntBASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms