Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC136428.4-201ENST00000634254 1155 ntBASIC6.73□□□□□ -1.33
RPAP1Q9BWH6 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RPAP1Q9BWH6 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
RPAP1Q9BWH6 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.73□□□□□ -1.33
RPAP1Q9BWH6 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RPAP1Q9BWH6 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
RPAP1Q9BWH6 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
RPAP1Q9BWH6 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RPAP1Q9BWH6 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RPAP1Q9BWH6 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.73□□□□□ -1.33
RPAP1Q9BWH6 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RPAP1Q9BWH6 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.73□□□□□ -1.33
RPAP1Q9BWH6 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.72□□□□□ -1.33
RPAP1Q9BWH6 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
RPAP1Q9BWH6 RNA5SP507-201ENST00000363603 121 ntBASIC6.72□□□□□ -1.33
RPAP1Q9BWH6 RPS6P23-201ENST00000413224 722 ntBASIC6.72□□□□□ -1.33
RPAP1Q9BWH6 SLC35E1P1-201ENST00000419313 864 ntBASIC6.72□□□□□ -1.33
RPAP1Q9BWH6 AC009506.2-201ENST00000420635 840 ntBASIC6.72□□□□□ -1.33
RPAP1Q9BWH6 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RPAP1Q9BWH6 RPS27AP6-201ENST00000427962 448 ntBASIC6.72□□□□□ -1.33
RPAP1Q9BWH6 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC6.72□□□□□ -1.33
RPAP1Q9BWH6 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.72□□□□□ -1.33
RPAP1Q9BWH6 AP000547.1-201ENST00000454360 617 ntBASIC6.72□□□□□ -1.33
RPAP1Q9BWH6 AC008953.1-201ENST00000497334 318 ntBASIC6.72□□□□□ -1.33
RPAP1Q9BWH6 RN7SKP253-201ENST00000516424 309 ntBASIC6.72□□□□□ -1.33
RPAP1Q9BWH6 AC084824.2-201ENST00000548906 345 ntBASIC6.72□□□□□ -1.33
RPAP1Q9BWH6 AL049779.2-201ENST00000553847 315 ntBASIC6.72□□□□□ -1.33
RPAP1Q9BWH6 AC004825.1-201ENST00000555068 586 ntBASIC6.72□□□□□ -1.33
RPAP1Q9BWH6 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.72□□□□□ -1.33
RPAP1Q9BWH6 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.72□□□□□ -1.33
RPAP1Q9BWH6 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.72□□□□□ -1.33
RPAP1Q9BWH6 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.72□□□□□ -1.33
RPAP1Q9BWH6 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RPAP1Q9BWH6 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.72□□□□□ -1.33
RPAP1Q9BWH6 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RPAP1Q9BWH6 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RPAP1Q9BWH6 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RPAP1Q9BWH6 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RPAP1Q9BWH6 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RPAP1Q9BWH6 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RPAP1Q9BWH6 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RPAP1Q9BWH6 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
RPAP1Q9BWH6 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
RPAP1Q9BWH6 U3.2-201ENST00000362981 210 ntBASIC6.71□□□□□ -1.33
RPAP1Q9BWH6 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
RPAP1Q9BWH6 RNU6-316P-201ENST00000391027 107 ntBASIC6.71□□□□□ -1.33
RPAP1Q9BWH6 AL645927.1-201ENST00000396783 406 ntBASIC6.71□□□□□ -1.33
RPAP1Q9BWH6 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.71□□□□□ -1.33
RPAP1Q9BWH6 RPL35AP24-201ENST00000413846 330 ntBASIC6.71□□□□□ -1.33
RPAP1Q9BWH6 RPL6P21-201ENST00000418672 846 ntBASIC6.71□□□□□ -1.33
RPAP1Q9BWH6 OR6D1P-201ENST00000436165 939 ntBASIC6.71□□□□□ -1.33
RPAP1Q9BWH6 NANOGP9-201ENST00000439890 892 ntBASIC6.71□□□□□ -1.33
RPAP1Q9BWH6 EEF1B2P5-201ENST00000444820 548 ntBASIC6.71□□□□□ -1.33
RPAP1Q9BWH6 AC023271.1-201ENST00000445936 1090 ntBASIC6.71□□□□□ -1.33
RPAP1Q9BWH6 RPS26P41-201ENST00000450370 284 ntBASIC6.71□□□□□ -1.33
RPAP1Q9BWH6 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.71□□□□□ -1.33
RPAP1Q9BWH6 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.71□□□□□ -1.33
RPAP1Q9BWH6 SNRPCP3-201ENST00000474888 476 ntBASIC6.71□□□□□ -1.33
RPAP1Q9BWH6 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
RPAP1Q9BWH6 RPL7P39-201ENST00000481157 744 ntBASIC6.71□□□□□ -1.33
RPAP1Q9BWH6 OR5M14P-201ENST00000506803 618 ntBASIC6.71□□□□□ -1.33
RPAP1Q9BWH6 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.71□□□□□ -1.33
RPAP1Q9BWH6 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.71□□□□□ -1.33
RPAP1Q9BWH6 OR4A46P-201ENST00000527255 933 ntBASIC6.71□□□□□ -1.33
RPAP1Q9BWH6 PMS2P3-207ENST00000529061 717 ntBASIC6.71□□□□□ -1.33
RPAP1Q9BWH6 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
RPAP1Q9BWH6 AL139407.1-201ENST00000613826 1175 ntBASIC6.71□□□□□ -1.33
RPAP1Q9BWH6 AC025574.2-201ENST00000615621 514 ntBASIC6.71□□□□□ -1.33
RPAP1Q9BWH6 MIR6133-201ENST00000617057 108 ntBASIC6.71□□□□□ -1.33
RPAP1Q9BWH6 AC132068.1-201ENST00000623805 459 ntBASIC6.71□□□□□ -1.33
RPAP1Q9BWH6 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.71□□□□□ -1.33
RPAP1Q9BWH6 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
RPAP1Q9BWH6 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.71□□□□□ -1.33
RPAP1Q9BWH6 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.71□□□□□ -1.34
RPAP1Q9BWH6 AC018809.2-201ENST00000602436 3823 ntBASIC6.71□□□□□ -1.34
RPAP1Q9BWH6 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.71□□□□□ -1.34
RPAP1Q9BWH6 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
RPAP1Q9BWH6 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
RPAP1Q9BWH6 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.71□□□□□ -1.34
RPAP1Q9BWH6 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.71□□□□□ -1.34
RPAP1Q9BWH6 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.71□□□□□ -1.34
RPAP1Q9BWH6 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.71□□□□□ -1.34
RPAP1Q9BWH6 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.71□□□□□ -1.34
RPAP1Q9BWH6 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RPAP1Q9BWH6 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC6.7□□□□□ -1.34
RPAP1Q9BWH6 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.7□□□□□ -1.34
RPAP1Q9BWH6 MIR223-201ENST00000385204 110 ntBASIC6.7□□□□□ -1.34
RPAP1Q9BWH6 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.7□□□□□ -1.34
RPAP1Q9BWH6 TMEM183AP1-205ENST00000432739 290 ntBASIC6.7□□□□□ -1.34
RPAP1Q9BWH6 FAR2P1-206ENST00000449736 709 ntBASIC6.7□□□□□ -1.34
RPAP1Q9BWH6 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.7□□□□□ -1.34
RPAP1Q9BWH6 RN7SL51P-201ENST00000468230 285 ntBASIC6.7□□□□□ -1.34
RPAP1Q9BWH6 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.7□□□□□ -1.34
RPAP1Q9BWH6 SEPT10P1-201ENST00000517342 1162 ntBASIC6.7□□□□□ -1.34
RPAP1Q9BWH6 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.7□□□□□ -1.34
RPAP1Q9BWH6 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.7□□□□□ -1.34
RPAP1Q9BWH6 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RPAP1Q9BWH6 H3F3BP2-201ENST00000583907 357 ntBASIC6.7□□□□□ -1.34
RPAP1Q9BWH6 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.7□□□□□ -1.34
RPAP1Q9BWH6 AC009237.13-201ENST00000603193 276 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms