Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 AC019322.1-201ENST00000571869 389 ntBASIC5.69□□□□□ -1.5
C9orf72Q96LT7 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 MIR4260-201ENST00000583107 67 ntBASIC5.69□□□□□ -1.5
C9orf72Q96LT7 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.69□□□□□ -1.5
C9orf72Q96LT7 RN7SL787P-201ENST00000613000 284 ntBASIC5.69□□□□□ -1.5
C9orf72Q96LT7 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 MIR193BHG-214ENST00000641765 509 ntBASIC5.69□□□□□ -1.5
C9orf72Q96LT7 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 AC012078.1-201ENST00000405035 1646 ntBASIC5.69□□□□□ -1.5
C9orf72Q96LT7 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
C9orf72Q96LT7 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
C9orf72Q96LT7 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
C9orf72Q96LT7 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
C9orf72Q96LT7 SNORA51.1-201ENST00000363243 140 ntBASIC5.68□□□□□ -1.5
C9orf72Q96LT7 NACAP7-201ENST00000407371 609 ntBASIC5.68□□□□□ -1.5
C9orf72Q96LT7 AK4P4-201ENST00000419465 646 ntBASIC5.68□□□□□ -1.5
C9orf72Q96LT7 RPL7P56-201ENST00000429441 717 ntBASIC5.68□□□□□ -1.5
C9orf72Q96LT7 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
C9orf72Q96LT7 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.68□□□□□ -1.5
C9orf72Q96LT7 IGBP1P3-201ENST00000447449 1000 ntBASIC5.68□□□□□ -1.5
C9orf72Q96LT7 AL596266.1-201ENST00000448132 400 ntBASIC5.68□□□□□ -1.5
C9orf72Q96LT7 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.68□□□□□ -1.5
C9orf72Q96LT7 RPS27AP2-201ENST00000457576 465 ntBASIC5.68□□□□□ -1.5
C9orf72Q96LT7 RN7SL188P-201ENST00000469842 285 ntBASIC5.68□□□□□ -1.5
C9orf72Q96LT7 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.68□□□□□ -1.5
C9orf72Q96LT7 RN7SL717P-201ENST00000478343 297 ntBASIC5.68□□□□□ -1.5
C9orf72Q96LT7 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.68□□□□□ -1.5
C9orf72Q96LT7 AC021193.1-201ENST00000511607 420 ntBASIC5.68□□□□□ -1.5
C9orf72Q96LT7 CYCSP22-201ENST00000517555 339 ntBASIC5.68□□□□□ -1.5
C9orf72Q96LT7 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.68□□□□□ -1.5
C9orf72Q96LT7 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.68□□□□□ -1.5
C9orf72Q96LT7 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.68□□□□□ -1.5
C9orf72Q96LT7 AC090286.3-201ENST00000573133 187 ntBASIC5.68□□□□□ -1.5
C9orf72Q96LT7 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.68□□□□□ -1.5
C9orf72Q96LT7 AP000894.4-201ENST00000610185 483 ntBASIC5.68□□□□□ -1.5
C9orf72Q96LT7 RNA5SP440-201ENST00000612665 119 ntBASIC5.68□□□□□ -1.5
C9orf72Q96LT7 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.68□□□□□ -1.5
C9orf72Q96LT7 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.68□□□□□ -1.5
C9orf72Q96LT7 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.68□□□□□ -1.5
C9orf72Q96LT7 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
C9orf72Q96LT7 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.68□□□□□ -1.5
C9orf72Q96LT7 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
C9orf72Q96LT7 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.68□□□□□ -1.5
C9orf72Q96LT7 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
C9orf72Q96LT7 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 AL034549.2-201ENST00000618285 3373 ntBASIC5.67□□□□□ -1.5
C9orf72Q96LT7 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 RNA5SP242-201ENST00000364171 118 ntBASIC5.67□□□□□ -1.5
C9orf72Q96LT7 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 NENFP1-201ENST00000419476 466 ntBASIC5.67□□□□□ -1.5
C9orf72Q96LT7 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 AC093155.2-201ENST00000420734 937 ntBASIC5.67□□□□□ -1.5
C9orf72Q96LT7 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 RPL34P3-201ENST00000421454 338 ntBASIC5.67□□□□□ -1.5
C9orf72Q96LT7 RIMKLBP2-201ENST00000424737 654 ntBASIC5.67□□□□□ -1.5
C9orf72Q96LT7 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 AL136231.1-201ENST00000429407 730 ntBASIC5.67□□□□□ -1.5
C9orf72Q96LT7 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 YWHAEP1-201ENST00000453697 763 ntBASIC5.67□□□□□ -1.5
C9orf72Q96LT7 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 AC023141.9-201ENST00000458734 412 ntBASIC5.67□□□□□ -1.5
C9orf72Q96LT7 PSAT1P4-201ENST00000466500 526 ntBASIC5.67□□□□□ -1.5
C9orf72Q96LT7 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 NENFP3-201ENST00000503735 313 ntBASIC5.67□□□□□ -1.5
C9orf72Q96LT7 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 AC021106.1-201ENST00000509020 1058 ntBASIC5.67□□□□□ -1.5
C9orf72Q96LT7 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms