Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC8.86□□□□□ -0.99
TOPBP1Q92547 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
TOPBP1Q92547 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
TOPBP1Q92547 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
TOPBP1Q92547 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
TOPBP1Q92547 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
TOPBP1Q92547 AL049693.1-201ENST00000402760 611 ntBASIC8.85□□□□□ -0.99
TOPBP1Q92547 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC8.85□□□□□ -0.99
TOPBP1Q92547 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC8.85□□□□□ -0.99
TOPBP1Q92547 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC8.85□□□□□ -0.99
TOPBP1Q92547 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC8.85□□□□□ -0.99
TOPBP1Q92547 RN7SKP260-201ENST00000516907 149 ntBASIC8.85□□□□□ -0.99
TOPBP1Q92547 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC8.85□□□□□ -0.99
TOPBP1Q92547 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC8.85□□□□□ -0.99
TOPBP1Q92547 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC8.85□□□□□ -0.99
TOPBP1Q92547 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC8.85□□□□□ -0.99
TOPBP1Q92547 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC8.85□□□□□ -0.99
TOPBP1Q92547 MYLK-221ENST00000583087 678 ntTSL 4 BASIC8.85□□□□□ -0.99
TOPBP1Q92547 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC8.85□□□□□ -0.99
TOPBP1Q92547 UGP2-232ENST00000640075 567 ntTSL 5 BASIC8.85□□□□□ -0.99
TOPBP1Q92547 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC8.85□□□□□ -0.99
TOPBP1Q92547 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
TOPBP1Q92547 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
TOPBP1Q92547 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
TOPBP1Q92547 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
TOPBP1Q92547 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
TOPBP1Q92547 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC8.85□□□□□ -0.99
TOPBP1Q92547 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC8.85□□□□□ -0.99
TOPBP1Q92547 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC8.85□□□□□ -0.99
TOPBP1Q92547 FHIT-201ENST00000341848 174 ntTSL 3 BASIC8.85□□□□□ -0.99
TOPBP1Q92547 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
TOPBP1Q92547 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC8.85□□□□□ -0.99
TOPBP1Q92547 AC079168.1-201ENST00000458741 345 ntBASIC8.85□□□□□ -0.99
TOPBP1Q92547 RN7SKP21-201ENST00000516503 220 ntBASIC8.85□□□□□ -0.99
TOPBP1Q92547 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC8.85□□□□□ -0.99
TOPBP1Q92547 AC233699.1-201ENST00000569955 1168 ntBASIC8.85□□□□□ -0.99
TOPBP1Q92547 SS18L2P2-201ENST00000583960 235 ntBASIC8.85□□□□□ -0.99
TOPBP1Q92547 ZNRD1ASP-221ENST00000637794 1074 ntBASIC8.85□□□□□ -0.99
TOPBP1Q92547 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
TOPBP1Q92547 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
TOPBP1Q92547 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
TOPBP1Q92547 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
TOPBP1Q92547 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
TOPBP1Q92547 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC8.84□□□□□ -0.99
TOPBP1Q92547 EEF1A1P36-201ENST00000427807 1351 ntBASIC8.84□□□□□ -0.99
TOPBP1Q92547 AC010401.2-201ENST00000575137 4934 ntBASIC8.84□□□□□ -0.99
TOPBP1Q92547 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
TOPBP1Q92547 AC068287.1-201ENST00000430283 295 ntBASIC8.84□□□□□ -0.99
TOPBP1Q92547 ATP6V0E1P2-201ENST00000441771 245 ntBASIC8.84□□□□□ -0.99
TOPBP1Q92547 RPL7AP28-201ENST00000464513 571 ntBASIC8.84□□□□□ -0.99
TOPBP1Q92547 AC006967.1-201ENST00000467608 589 ntBASIC8.84□□□□□ -0.99
TOPBP1Q92547 GAPDHP56-201ENST00000506031 988 ntBASIC8.84□□□□□ -0.99
TOPBP1Q92547 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC8.84□□□□□ -0.99
TOPBP1Q92547 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC8.84□□□□□ -0.99
TOPBP1Q92547 TOMM20P2-201ENST00000540082 421 ntBASIC8.84□□□□□ -0.99
TOPBP1Q92547 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC8.84□□□□□ -0.99
TOPBP1Q92547 MIR4284-201ENST00000578924 81 ntBASIC8.84□□□□□ -0.99
TOPBP1Q92547 AP000919.1-201ENST00000582850 985 ntBASIC8.84□□□□□ -0.99
TOPBP1Q92547 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC8.84□□□□□ -0.99
TOPBP1Q92547 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC8.84□□□□□ -1
TOPBP1Q92547 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -1
TOPBP1Q92547 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC8.83□□□□□ -1
TOPBP1Q92547 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC8.83□□□□□ -1
TOPBP1Q92547 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
TOPBP1Q92547 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC8.83□□□□□ -1
TOPBP1Q92547 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC8.83□□□□□ -1
TOPBP1Q92547 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
TOPBP1Q92547 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC8.83□□□□□ -1
TOPBP1Q92547 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
TOPBP1Q92547 Z98755.1-201ENST00000407015 1384 ntBASIC8.83□□□□□ -1
TOPBP1Q92547 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
TOPBP1Q92547 BX284613.1-201ENST00000452221 1641 ntBASIC8.83□□□□□ -1
TOPBP1Q92547 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
TOPBP1Q92547 TEK-202ENST00000406359 3935 ntTSL 2 BASIC8.83□□□□□ -1
TOPBP1Q92547 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC8.83□□□□□ -1
TOPBP1Q92547 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC8.83□□□□□ -1
TOPBP1Q92547 RPS27AP7-201ENST00000422792 455 ntBASIC8.83□□□□□ -1
TOPBP1Q92547 IGBP1P3-201ENST00000447449 1000 ntBASIC8.83□□□□□ -1
TOPBP1Q92547 AP002981.1-201ENST00000517692 975 ntBASIC8.83□□□□□ -1
TOPBP1Q92547 GTF2IP11-201ENST00000526931 420 ntBASIC8.83□□□□□ -1
TOPBP1Q92547 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC8.83□□□□□ -1
TOPBP1Q92547 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC8.83□□□□□ -1
TOPBP1Q92547 AL034374.2-201ENST00000605281 548 ntBASIC8.83□□□□□ -1
TOPBP1Q92547 UBA3-213ENST00000631029 123 ntTSL 5 BASIC8.83□□□□□ -1
TOPBP1Q92547 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
TOPBP1Q92547 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
TOPBP1Q92547 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
TOPBP1Q92547 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
TOPBP1Q92547 AC092070.2-203ENST00000598377 3644 ntBASIC8.82□□□□□ -1
TOPBP1Q92547 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
TOPBP1Q92547 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
TOPBP1Q92547 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC8.82□□□□□ -1
TOPBP1Q92547 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC8.82□□□□□ -1
TOPBP1Q92547 OR52J1P-201ENST00000450596 932 ntBASIC8.82□□□□□ -1
TOPBP1Q92547 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC8.82□□□□□ -1
TOPBP1Q92547 AC093720.1-201ENST00000505681 714 ntBASIC8.82□□□□□ -1
TOPBP1Q92547 MRPS33P2-201ENST00000507850 322 ntBASIC8.82□□□□□ -1
TOPBP1Q92547 AC020937.1-201ENST00000519677 1013 ntBASIC8.82□□□□□ -1
TOPBP1Q92547 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC8.82□□□□□ -1
TOPBP1Q92547 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC8.82□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms