Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.39□□□□□ -1.55
RAB43Q86YS6 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.39□□□□□ -1.55
RAB43Q86YS6 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.39□□□□□ -1.55
RAB43Q86YS6 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.39□□□□□ -1.55
RAB43Q86YS6 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RAB43Q86YS6 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.39□□□□□ -1.55
RAB43Q86YS6 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RAB43Q86YS6 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.39□□□□□ -1.55
RAB43Q86YS6 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RAB43Q86YS6 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RAB43Q86YS6 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RAB43Q86YS6 AP000534.2-201ENST00000412729 568 ntBASIC5.39□□□□□ -1.55
RAB43Q86YS6 AL357752.1-201ENST00000412817 349 ntBASIC5.39□□□□□ -1.55
RAB43Q86YS6 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.39□□□□□ -1.55
RAB43Q86YS6 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.39□□□□□ -1.55
RAB43Q86YS6 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.39□□□□□ -1.55
RAB43Q86YS6 REREP1Y-201ENST00000422655 198 ntBASIC5.39□□□□□ -1.55
RAB43Q86YS6 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.39□□□□□ -1.55
RAB43Q86YS6 FMO7P-201ENST00000436045 768 ntBASIC5.39□□□□□ -1.55
RAB43Q86YS6 RPS12P17-201ENST00000438591 377 ntBASIC5.39□□□□□ -1.55
RAB43Q86YS6 REREP2Y-201ENST00000439103 200 ntBASIC5.39□□□□□ -1.55
RAB43Q86YS6 AL163193.1-201ENST00000444895 788 ntBASIC5.39□□□□□ -1.55
RAB43Q86YS6 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
RAB43Q86YS6 RPL32P33-201ENST00000487023 394 ntBASIC5.39□□□□□ -1.55
RAB43Q86YS6 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.39□□□□□ -1.55
RAB43Q86YS6 AC008638.1-201ENST00000506035 866 ntBASIC5.39□□□□□ -1.55
RAB43Q86YS6 GLUD1P3-202ENST00000508551 200 ntBASIC5.39□□□□□ -1.55
RAB43Q86YS6 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.39□□□□□ -1.55
RAB43Q86YS6 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.39□□□□□ -1.55
RAB43Q86YS6 NPM1P21-201ENST00000513394 762 ntBASIC5.39□□□□□ -1.55
RAB43Q86YS6 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.39□□□□□ -1.55
RAB43Q86YS6 AC021678.3-201ENST00000517893 476 ntBASIC5.39□□□□□ -1.55
RAB43Q86YS6 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.39□□□□□ -1.55
RAB43Q86YS6 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.39□□□□□ -1.55
RAB43Q86YS6 AL359219.2-201ENST00000555184 348 ntBASIC5.39□□□□□ -1.55
RAB43Q86YS6 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.39□□□□□ -1.55
RAB43Q86YS6 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.39□□□□□ -1.55
RAB43Q86YS6 SDR42E1P1-201ENST00000611327 477 ntBASIC5.39□□□□□ -1.55
RAB43Q86YS6 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RAB43Q86YS6 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
RAB43Q86YS6 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RAB43Q86YS6 AC006600.2-201ENST00000624834 2506 ntBASIC5.39□□□□□ -1.55
RAB43Q86YS6 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RAB43Q86YS6 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.39□□□□□ -1.55
RAB43Q86YS6 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
RAB43Q86YS6 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RAB43Q86YS6 OR9K1P-202ENST00000641111 3217 ntBASIC5.38□□□□□ -1.55
RAB43Q86YS6 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
RAB43Q86YS6 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RAB43Q86YS6 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
RAB43Q86YS6 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RAB43Q86YS6 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
RAB43Q86YS6 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RAB43Q86YS6 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RAB43Q86YS6 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RAB43Q86YS6 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RAB43Q86YS6 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.38□□□□□ -1.55
RAB43Q86YS6 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
RAB43Q86YS6 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.38□□□□□ -1.55
RAB43Q86YS6 GAPDHP42-201ENST00000406848 981 ntBASIC5.38□□□□□ -1.55
RAB43Q86YS6 AL358178.1-201ENST00000407698 397 ntBASIC5.38□□□□□ -1.55
RAB43Q86YS6 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.38□□□□□ -1.55
RAB43Q86YS6 BX510359.3-201ENST00000422168 306 ntBASIC5.38□□□□□ -1.55
RAB43Q86YS6 AL355433.1-201ENST00000422804 300 ntBASIC5.38□□□□□ -1.55
RAB43Q86YS6 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.38□□□□□ -1.55
RAB43Q86YS6 AC015983.1-201ENST00000441577 373 ntBASIC5.38□□□□□ -1.55
RAB43Q86YS6 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RAB43Q86YS6 AC023271.1-201ENST00000445936 1090 ntBASIC5.38□□□□□ -1.55
RAB43Q86YS6 AC007386.1-201ENST00000455212 582 ntBASIC5.38□□□□□ -1.55
RAB43Q86YS6 RN7SL197P-201ENST00000466981 299 ntBASIC5.38□□□□□ -1.55
RAB43Q86YS6 OR2AO1P-201ENST00000476497 403 ntBASIC5.38□□□□□ -1.55
RAB43Q86YS6 RPL38P3-201ENST00000484463 213 ntBASIC5.38□□□□□ -1.55
RAB43Q86YS6 AC009120.1-201ENST00000493458 473 ntBASIC5.38□□□□□ -1.55
RAB43Q86YS6 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.38□□□□□ -1.55
RAB43Q86YS6 TOMM22P4-201ENST00000511318 336 ntBASIC5.38□□□□□ -1.55
RAB43Q86YS6 MIR2117-201ENST00000516780 80 ntBASIC5.38□□□□□ -1.55
RAB43Q86YS6 MRPS16P1-201ENST00000523462 412 ntBASIC5.38□□□□□ -1.55
RAB43Q86YS6 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.38□□□□□ -1.55
RAB43Q86YS6 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.38□□□□□ -1.55
RAB43Q86YS6 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.38□□□□□ -1.55
RAB43Q86YS6 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
RAB43Q86YS6 DPPA2P4-201ENST00000563717 878 ntBASIC5.38□□□□□ -1.55
RAB43Q86YS6 AC007346.2-201ENST00000564816 892 ntBASIC5.38□□□□□ -1.55
RAB43Q86YS6 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RAB43Q86YS6 MIR4443-201ENST00000585052 53 ntBASIC5.38□□□□□ -1.55
RAB43Q86YS6 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.38□□□□□ -1.55
RAB43Q86YS6 AL034374.2-201ENST00000605281 548 ntBASIC5.38□□□□□ -1.55
RAB43Q86YS6 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.38□□□□□ -1.55
RAB43Q86YS6 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.38□□□□□ -1.55
RAB43Q86YS6 AC021766.1-201ENST00000624404 741 ntBASIC5.38□□□□□ -1.55
RAB43Q86YS6 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.38□□□□□ -1.55
RAB43Q86YS6 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.38□□□□□ -1.55
RAB43Q86YS6 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
RAB43Q86YS6 NR1H5P-201ENST00000452683 1377 ntBASIC5.38□□□□□ -1.55
RAB43Q86YS6 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RAB43Q86YS6 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RAB43Q86YS6 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.38□□□□□ -1.55
RAB43Q86YS6 AC114786.1-201ENST00000512892 1415 ntBASIC5.38□□□□□ -1.55
RAB43Q86YS6 AL158152.1-201ENST00000602652 1435 ntBASIC5.38□□□□□ -1.55
RAB43Q86YS6 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms