Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 MIR4489-201ENST00000578869 62 ntBASIC6.68□□□□□ -1.34
CTR9Q6PD62 MIR4311-201ENST00000580794 100 ntBASIC6.68□□□□□ -1.34
CTR9Q6PD62 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.68□□□□□ -1.34
CTR9Q6PD62 PPATP2-201ENST00000605635 508 ntBASIC6.68□□□□□ -1.34
CTR9Q6PD62 AC025574.2-201ENST00000615621 514 ntBASIC6.68□□□□□ -1.34
CTR9Q6PD62 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CTR9Q6PD62 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
CTR9Q6PD62 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CTR9Q6PD62 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
CTR9Q6PD62 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CTR9Q6PD62 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CTR9Q6PD62 AC020633.1-201ENST00000468439 2247 ntBASIC6.68□□□□□ -1.34
CTR9Q6PD62 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
CTR9Q6PD62 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
CTR9Q6PD62 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CTR9Q6PD62 BCORP1-203ENST00000513194 5093 ntBASIC6.67□□□□□ -1.34
CTR9Q6PD62 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CTR9Q6PD62 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
CTR9Q6PD62 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CTR9Q6PD62 RNA5SP234-201ENST00000363916 119 ntBASIC6.67□□□□□ -1.34
CTR9Q6PD62 RNA5SP187-201ENST00000384400 119 ntBASIC6.67□□□□□ -1.34
CTR9Q6PD62 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CTR9Q6PD62 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.67□□□□□ -1.34
CTR9Q6PD62 AC096921.1-201ENST00000411661 375 ntBASIC6.67□□□□□ -1.34
CTR9Q6PD62 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.67□□□□□ -1.34
CTR9Q6PD62 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.67□□□□□ -1.34
CTR9Q6PD62 GAPDHP14-201ENST00000450472 937 ntBASIC6.67□□□□□ -1.34
CTR9Q6PD62 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.67□□□□□ -1.34
CTR9Q6PD62 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.67□□□□□ -1.34
CTR9Q6PD62 EIF3LP3-201ENST00000495197 822 ntBASIC6.67□□□□□ -1.34
CTR9Q6PD62 AC021146.10-201ENST00000515628 706 ntBASIC6.67□□□□□ -1.34
CTR9Q6PD62 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.67□□□□□ -1.34
CTR9Q6PD62 IGKV2-18-201ENST00000522607 343 ntBASIC6.67□□□□□ -1.34
CTR9Q6PD62 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.67□□□□□ -1.34
CTR9Q6PD62 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.67□□□□□ -1.34
CTR9Q6PD62 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.67□□□□□ -1.34
CTR9Q6PD62 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CTR9Q6PD62 AC015720.2-201ENST00000567709 334 ntBASIC6.67□□□□□ -1.34
CTR9Q6PD62 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CTR9Q6PD62 AC010245.2-201ENST00000606908 1167 ntBASIC6.67□□□□□ -1.34
CTR9Q6PD62 AC132068.1-201ENST00000623805 459 ntBASIC6.67□□□□□ -1.34
CTR9Q6PD62 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.67□□□□□ -1.34
CTR9Q6PD62 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.67□□□□□ -1.34
CTR9Q6PD62 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CTR9Q6PD62 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CTR9Q6PD62 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.67□□□□□ -1.34
CTR9Q6PD62 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CTR9Q6PD62 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CTR9Q6PD62 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
CTR9Q6PD62 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CTR9Q6PD62 MTCO1P7-201ENST00000419523 1542 ntBASIC6.66□□□□□ -1.34
CTR9Q6PD62 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CTR9Q6PD62 RNA5SP326-201ENST00000363209 110 ntBASIC6.66□□□□□ -1.34
CTR9Q6PD62 RN7SKP28-201ENST00000364770 305 ntBASIC6.66□□□□□ -1.34
CTR9Q6PD62 RNU1-136P-201ENST00000384181 164 ntBASIC6.66□□□□□ -1.34
CTR9Q6PD62 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.66□□□□□ -1.34
CTR9Q6PD62 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.66□□□□□ -1.34
CTR9Q6PD62 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.66□□□□□ -1.34
CTR9Q6PD62 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.66□□□□□ -1.34
CTR9Q6PD62 PDCL3P4-201ENST00000489621 720 ntBASIC6.66□□□□□ -1.34
CTR9Q6PD62 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CTR9Q6PD62 GOLGA5P1-201ENST00000507317 980 ntBASIC6.66□□□□□ -1.34
CTR9Q6PD62 AC027026.1-201ENST00000532323 742 ntBASIC6.66□□□□□ -1.34
CTR9Q6PD62 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.66□□□□□ -1.34
CTR9Q6PD62 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.66□□□□□ -1.34
CTR9Q6PD62 AC137627.1-201ENST00000545761 289 ntBASIC6.66□□□□□ -1.34
CTR9Q6PD62 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.66□□□□□ -1.34
CTR9Q6PD62 AC079395.2-201ENST00000610982 737 ntBASIC6.66□□□□□ -1.34
CTR9Q6PD62 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
CTR9Q6PD62 AC093849.1-201ENST00000563631 2209 ntBASIC6.66□□□□□ -1.34
CTR9Q6PD62 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.66□□□□□ -1.34
CTR9Q6PD62 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CTR9Q6PD62 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.66□□□□□ -1.34
CTR9Q6PD62 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CTR9Q6PD62 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CTR9Q6PD62 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.66□□□□□ -1.34
CTR9Q6PD62 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.66□□□□□ -1.34
CTR9Q6PD62 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
CTR9Q6PD62 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.66□□□□□ -1.34
CTR9Q6PD62 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CTR9Q6PD62 XKRY2-202ENST00000623874 1581 ntBASIC6.65□□□□□ -1.34
CTR9Q6PD62 XKRY-202ENST00000624960 1581 ntBASIC6.65□□□□□ -1.34
CTR9Q6PD62 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CTR9Q6PD62 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CTR9Q6PD62 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
CTR9Q6PD62 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.65□□□□□ -1.34
CTR9Q6PD62 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.65□□□□□ -1.34
CTR9Q6PD62 RN7SKP162-201ENST00000363605 345 ntBASIC6.65□□□□□ -1.34
CTR9Q6PD62 OR6D1P-201ENST00000436165 939 ntBASIC6.65□□□□□ -1.34
CTR9Q6PD62 KRT8P51-201ENST00000438938 274 ntBASIC6.65□□□□□ -1.34
CTR9Q6PD62 AL596266.1-201ENST00000448132 400 ntBASIC6.65□□□□□ -1.34
CTR9Q6PD62 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.65□□□□□ -1.34
CTR9Q6PD62 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.65□□□□□ -1.34
CTR9Q6PD62 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.65□□□□□ -1.34
CTR9Q6PD62 RN7SL547P-201ENST00000490793 290 ntBASIC6.65□□□□□ -1.34
CTR9Q6PD62 AC108693.1-201ENST00000496068 432 ntBASIC6.65□□□□□ -1.34
CTR9Q6PD62 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.65□□□□□ -1.34
CTR9Q6PD62 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC6.65□□□□□ -1.34
CTR9Q6PD62 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.65□□□□□ -1.34
CTR9Q6PD62 AP000864.1-201ENST00000609424 650 ntBASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms