Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 AC063976.2-201ENST00000425667 3556 ntBASIC5.07□□□□□ -1.6
LPCAT4Q643R3 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 RNA5SP30-201ENST00000365552 115 ntBASIC5.07□□□□□ -1.6
LPCAT4Q643R3 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 NENFP1-201ENST00000419476 466 ntBASIC5.07□□□□□ -1.6
LPCAT4Q643R3 MARK2P12-201ENST00000420129 585 ntBASIC5.07□□□□□ -1.6
LPCAT4Q643R3 RPS19P6-201ENST00000441327 433 ntBASIC5.07□□□□□ -1.6
LPCAT4Q643R3 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 AP002453.1-201ENST00000492327 668 ntBASIC5.07□□□□□ -1.6
LPCAT4Q643R3 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 HMGN1P16-201ENST00000508308 283 ntBASIC5.07□□□□□ -1.6
LPCAT4Q643R3 RNU2-45P-201ENST00000516068 187 ntBASIC5.07□□□□□ -1.6
LPCAT4Q643R3 RNA5SP441-201ENST00000516809 88 ntBASIC5.07□□□□□ -1.6
LPCAT4Q643R3 AC113191.1-201ENST00000517759 403 ntBASIC5.07□□□□□ -1.6
LPCAT4Q643R3 AC021678.3-201ENST00000517893 476 ntBASIC5.07□□□□□ -1.6
LPCAT4Q643R3 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 AC007346.1-201ENST00000569208 867 ntBASIC5.07□□□□□ -1.6
LPCAT4Q643R3 AC004232.2-201ENST00000574245 821 ntBASIC5.07□□□□□ -1.6
LPCAT4Q643R3 OR1E3-201ENST00000575608 948 ntBASIC5.07□□□□□ -1.6
LPCAT4Q643R3 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 AC092681.3-201ENST00000609463 678 ntBASIC5.07□□□□□ -1.6
LPCAT4Q643R3 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 AC015914.2-201ENST00000618167 288 ntBASIC5.07□□□□□ -1.6
LPCAT4Q643R3 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 MIR6823-201ENST00000622118 61 ntBASIC5.07□□□□□ -1.6
LPCAT4Q643R3 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 AC129915.3-201ENST00000634128 948 ntBASIC5.07□□□□□ -1.6
LPCAT4Q643R3 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LPCAT4Q643R3 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LPCAT4Q643R3 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.06□□□□□ -1.6
LPCAT4Q643R3 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.06□□□□□ -1.6
LPCAT4Q643R3 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LPCAT4Q643R3 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.06□□□□□ -1.6
LPCAT4Q643R3 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LPCAT4Q643R3 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.06□□□□□ -1.6
LPCAT4Q643R3 RNU1-19P-201ENST00000363306 165 ntBASIC5.06□□□□□ -1.6
LPCAT4Q643R3 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
LPCAT4Q643R3 AC013442.1-201ENST00000397347 228 ntBASIC5.06□□□□□ -1.6
LPCAT4Q643R3 AL354890.1-201ENST00000413730 346 ntBASIC5.06□□□□□ -1.6
LPCAT4Q643R3 AC007738.1-201ENST00000413892 348 ntBASIC5.06□□□□□ -1.6
LPCAT4Q643R3 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.06□□□□□ -1.6
LPCAT4Q643R3 RPL36AP10-201ENST00000421785 322 ntBASIC5.06□□□□□ -1.6
LPCAT4Q643R3 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.06□□□□□ -1.6
LPCAT4Q643R3 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.06□□□□□ -1.6
LPCAT4Q643R3 AL353662.1-201ENST00000439099 327 ntBASIC5.06□□□□□ -1.6
LPCAT4Q643R3 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.06□□□□□ -1.6
LPCAT4Q643R3 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.06□□□□□ -1.6
LPCAT4Q643R3 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.06□□□□□ -1.6
LPCAT4Q643R3 AL591473.1-201ENST00000464297 313 ntBASIC5.06□□□□□ -1.6
LPCAT4Q643R3 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.06□□□□□ -1.6
LPCAT4Q643R3 AC009120.1-201ENST00000493458 473 ntBASIC5.06□□□□□ -1.6
LPCAT4Q643R3 AC113367.2-201ENST00000505749 160 ntBASIC5.06□□□□□ -1.6
LPCAT4Q643R3 RNA5SP303-201ENST00000516192 130 ntBASIC5.06□□□□□ -1.6
LPCAT4Q643R3 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LPCAT4Q643R3 AL390726.5-202ENST00000564800 256 ntBASIC5.06□□□□□ -1.6
LPCAT4Q643R3 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.06□□□□□ -1.6
LPCAT4Q643R3 CCDC58P1-201ENST00000578567 430 ntBASIC5.06□□□□□ -1.6
LPCAT4Q643R3 AP005403.1-201ENST00000579720 229 ntBASIC5.06□□□□□ -1.6
LPCAT4Q643R3 AC011840.5-201ENST00000582125 771 ntBASIC5.06□□□□□ -1.6
LPCAT4Q643R3 MIR4260-201ENST00000583107 67 ntBASIC5.06□□□□□ -1.6
LPCAT4Q643R3 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.06□□□□□ -1.6
LPCAT4Q643R3 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.06□□□□□ -1.6
LPCAT4Q643R3 AC012676.3-201ENST00000614983 479 ntBASIC5.06□□□□□ -1.6
LPCAT4Q643R3 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LPCAT4Q643R3 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
LPCAT4Q643R3 AC019072.1-201ENST00000604535 1551 ntBASIC5.06□□□□□ -1.6
LPCAT4Q643R3 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
LPCAT4Q643R3 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LPCAT4Q643R3 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
LPCAT4Q643R3 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LPCAT4Q643R3 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms