Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC093166.3-201ENST00000448785 303 ntBASIC5.13□□□□□ -1.59
RFX4Q33E94 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.13□□□□□ -1.59
RFX4Q33E94 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RFX4Q33E94 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.13□□□□□ -1.59
RFX4Q33E94 IMPA1P1-201ENST00000510718 842 ntBASIC5.13□□□□□ -1.59
RFX4Q33E94 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.13□□□□□ -1.59
RFX4Q33E94 HSD3BP3-201ENST00000514706 994 ntBASIC5.13□□□□□ -1.59
RFX4Q33E94 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.13□□□□□ -1.59
RFX4Q33E94 AC027369.5-201ENST00000533838 755 ntBASIC5.13□□□□□ -1.59
RFX4Q33E94 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.13□□□□□ -1.59
RFX4Q33E94 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.13□□□□□ -1.59
RFX4Q33E94 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.13□□□□□ -1.59
RFX4Q33E94 AL356801.1-201ENST00000559320 294 ntBASIC5.13□□□□□ -1.59
RFX4Q33E94 AC105036.1-201ENST00000566222 271 ntBASIC5.13□□□□□ -1.59
RFX4Q33E94 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.13□□□□□ -1.59
RFX4Q33E94 MIR4472-2-201ENST00000582069 67 ntBASIC5.13□□□□□ -1.59
RFX4Q33E94 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.13□□□□□ -1.59
RFX4Q33E94 AC108738.1-201ENST00000603703 237 ntBASIC5.13□□□□□ -1.59
RFX4Q33E94 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RFX4Q33E94 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.13□□□□□ -1.59
RFX4Q33E94 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.13□□□□□ -1.59
RFX4Q33E94 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.13□□□□□ -1.59
RFX4Q33E94 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFX4Q33E94 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.13□□□□□ -1.59
RFX4Q33E94 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RFX4Q33E94 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFX4Q33E94 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RFX4Q33E94 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFX4Q33E94 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.13□□□□□ -1.59
RFX4Q33E94 AC019072.1-201ENST00000604535 1551 ntBASIC5.12□□□□□ -1.59
RFX4Q33E94 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
RFX4Q33E94 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFX4Q33E94 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
RFX4Q33E94 AL445213.1-201ENST00000412589 747 ntBASIC5.12□□□□□ -1.59
RFX4Q33E94 MRPL53P1-201ENST00000414323 319 ntBASIC5.12□□□□□ -1.59
RFX4Q33E94 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.12□□□□□ -1.59
RFX4Q33E94 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.12□□□□□ -1.59
RFX4Q33E94 BX284632.2-201ENST00000421091 399 ntBASIC5.12□□□□□ -1.59
RFX4Q33E94 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RFX4Q33E94 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.12□□□□□ -1.59
RFX4Q33E94 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.12□□□□□ -1.59
RFX4Q33E94 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
RFX4Q33E94 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.12□□□□□ -1.59
RFX4Q33E94 AL512605.1-202ENST00000441919 381 ntBASIC5.12□□□□□ -1.59
RFX4Q33E94 AL359955.2-201ENST00000445380 353 ntBASIC5.12□□□□□ -1.59
RFX4Q33E94 EEF1B2P3-201ENST00000447718 678 ntBASIC5.12□□□□□ -1.59
RFX4Q33E94 AC073610.1-201ENST00000489971 396 ntBASIC5.12□□□□□ -1.59
RFX4Q33E94 RPL9P15-201ENST00000491096 532 ntBASIC5.12□□□□□ -1.59
RFX4Q33E94 RN7SL193P-201ENST00000491708 276 ntBASIC5.12□□□□□ -1.59
RFX4Q33E94 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.12□□□□□ -1.59
RFX4Q33E94 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.12□□□□□ -1.59
RFX4Q33E94 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.12□□□□□ -1.59
RFX4Q33E94 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.12□□□□□ -1.59
RFX4Q33E94 TRIM51DP-201ENST00000529746 596 ntBASIC5.12□□□□□ -1.59
RFX4Q33E94 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
RFX4Q33E94 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.12□□□□□ -1.59
RFX4Q33E94 AC007956.1-201ENST00000555623 542 ntBASIC5.12□□□□□ -1.59
RFX4Q33E94 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.12□□□□□ -1.59
RFX4Q33E94 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.12□□□□□ -1.59
RFX4Q33E94 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RFX4Q33E94 AP001437.1-201ENST00000608783 456 ntBASIC5.12□□□□□ -1.59
RFX4Q33E94 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.12□□□□□ -1.59
RFX4Q33E94 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.12□□□□□ -1.59
RFX4Q33E94 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RFX4Q33E94 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.12□□□□□ -1.59
RFX4Q33E94 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFX4Q33E94 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RFX4Q33E94 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.12□□□□□ -1.59
RFX4Q33E94 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RFX4Q33E94 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFX4Q33E94 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RFX4Q33E94 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFX4Q33E94 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
RFX4Q33E94 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFX4Q33E94 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.11□□□□□ -1.59
RFX4Q33E94 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
RFX4Q33E94 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.11□□□□□ -1.59
RFX4Q33E94 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RFX4Q33E94 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
RFX4Q33E94 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RFX4Q33E94 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.11□□□□□ -1.59
RFX4Q33E94 MIR1275-201ENST00000408770 80 ntBASIC5.11□□□□□ -1.59
RFX4Q33E94 NPM1P40-201ENST00000412758 733 ntBASIC5.11□□□□□ -1.59
RFX4Q33E94 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RFX4Q33E94 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.11□□□□□ -1.59
RFX4Q33E94 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.11□□□□□ -1.59
RFX4Q33E94 AC126120.1-201ENST00000431082 470 ntBASIC5.11□□□□□ -1.59
RFX4Q33E94 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.11□□□□□ -1.59
RFX4Q33E94 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.11□□□□□ -1.59
RFX4Q33E94 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.11□□□□□ -1.59
RFX4Q33E94 AC073909.1-201ENST00000447112 999 ntBASIC5.11□□□□□ -1.59
RFX4Q33E94 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.11□□□□□ -1.59
RFX4Q33E94 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.11□□□□□ -1.59
RFX4Q33E94 PPIAP27-201ENST00000453800 265 ntBASIC5.11□□□□□ -1.59
RFX4Q33E94 AC245028.2-201ENST00000458673 253 ntBASIC5.11□□□□□ -1.59
RFX4Q33E94 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.11□□□□□ -1.59
RFX4Q33E94 RPS12P31-201ENST00000491419 398 ntBASIC5.11□□□□□ -1.59
RFX4Q33E94 RBBP4P1-201ENST00000502424 1276 ntBASIC5.11□□□□□ -1.59
RFX4Q33E94 IGBP1P4-201ENST00000503202 879 ntBASIC5.11□□□□□ -1.59
RFX4Q33E94 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms