Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HMGCS1Q01581 AC079809.1-201ENST00000415468 276 ntBASIC5.27□□□□□ -1.57
HMGCS1Q01581 AC113412.1-201ENST00000425840 504 ntBASIC5.27□□□□□ -1.57
HMGCS1Q01581 MTND6P12-201ENST00000428247 522 ntBASIC5.27□□□□□ -1.57
HMGCS1Q01581 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.27□□□□□ -1.57
HMGCS1Q01581 OR6D1P-201ENST00000436165 939 ntBASIC5.27□□□□□ -1.57
HMGCS1Q01581 SERPINA7P1-201ENST00000443077 631 ntBASIC5.27□□□□□ -1.57
HMGCS1Q01581 REG1CP-206ENST00000447469 496 ntBASIC5.27□□□□□ -1.57
HMGCS1Q01581 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.27□□□□□ -1.57
HMGCS1Q01581 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.27□□□□□ -1.57
HMGCS1Q01581 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.27□□□□□ -1.57
HMGCS1Q01581 OR4A43P-201ENST00000532938 908 ntBASIC5.27□□□□□ -1.57
HMGCS1Q01581 OR8G3P-201ENST00000533406 921 ntBASIC5.27□□□□□ -1.57
HMGCS1Q01581 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HMGCS1Q01581 AP000619.2-201ENST00000546014 969 ntBASIC5.27□□□□□ -1.57
HMGCS1Q01581 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.27□□□□□ -1.57
HMGCS1Q01581 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.27□□□□□ -1.57
HMGCS1Q01581 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.27□□□□□ -1.57
HMGCS1Q01581 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.27□□□□□ -1.57
HMGCS1Q01581 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.27□□□□□ -1.57
HMGCS1Q01581 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.27□□□□□ -1.57
HMGCS1Q01581 MIR7853-201ENST00000584820 132 ntBASIC5.27□□□□□ -1.57
HMGCS1Q01581 AC008521.2-201ENST00000591021 259 ntBASIC5.27□□□□□ -1.57
HMGCS1Q01581 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.27□□□□□ -1.57
HMGCS1Q01581 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.27□□□□□ -1.57
HMGCS1Q01581 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.27□□□□□ -1.57
HMGCS1Q01581 MIR193BHG-214ENST00000641765 509 ntBASIC5.27□□□□□ -1.57
HMGCS1Q01581 AC008691.1-209ENST00000642094 814 ntBASIC5.27□□□□□ -1.57
HMGCS1Q01581 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HMGCS1Q01581 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HMGCS1Q01581 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.27□□□□□ -1.57
HMGCS1Q01581 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HMGCS1Q01581 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HMGCS1Q01581 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HMGCS1Q01581 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HMGCS1Q01581 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
HMGCS1Q01581 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.26□□□□□ -1.57
HMGCS1Q01581 OR13C1P-202ENST00000641378 2919 ntBASIC5.26□□□□□ -1.57
HMGCS1Q01581 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.26□□□□□ -1.57
HMGCS1Q01581 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
HMGCS1Q01581 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HMGCS1Q01581 MIR133A2-201ENST00000347538 102 ntBASIC5.26□□□□□ -1.57
HMGCS1Q01581 RN7SKP292-201ENST00000365522 317 ntBASIC5.26□□□□□ -1.57
HMGCS1Q01581 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HMGCS1Q01581 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.26□□□□□ -1.57
HMGCS1Q01581 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HMGCS1Q01581 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.26□□□□□ -1.57
HMGCS1Q01581 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.26□□□□□ -1.57
HMGCS1Q01581 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.26□□□□□ -1.57
HMGCS1Q01581 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.26□□□□□ -1.57
HMGCS1Q01581 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HMGCS1Q01581 AC092106.1-201ENST00000444291 373 ntBASIC5.26□□□□□ -1.57
HMGCS1Q01581 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
HMGCS1Q01581 IGBP1P4-201ENST00000503202 879 ntBASIC5.26□□□□□ -1.57
HMGCS1Q01581 AC021193.1-201ENST00000511607 420 ntBASIC5.26□□□□□ -1.57
HMGCS1Q01581 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.26□□□□□ -1.57
HMGCS1Q01581 SCARNA20.4-201ENST00000516969 131 ntBASIC5.26□□□□□ -1.57
HMGCS1Q01581 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.26□□□□□ -1.57
HMGCS1Q01581 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.26□□□□□ -1.57
HMGCS1Q01581 OR11H3P-201ENST00000554547 982 ntBASIC5.26□□□□□ -1.57
HMGCS1Q01581 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.26□□□□□ -1.57
HMGCS1Q01581 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
HMGCS1Q01581 PPATP2-201ENST00000605635 508 ntBASIC5.26□□□□□ -1.57
HMGCS1Q01581 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.26□□□□□ -1.57
HMGCS1Q01581 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.26□□□□□ -1.57
HMGCS1Q01581 AC135068.5-201ENST00000624197 983 ntBASIC5.26□□□□□ -1.57
HMGCS1Q01581 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.26□□□□□ -1.57
HMGCS1Q01581 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
HMGCS1Q01581 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
HMGCS1Q01581 OR4G1P-202ENST00000641173 1788 ntBASIC5.26□□□□□ -1.57
HMGCS1Q01581 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HMGCS1Q01581 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HMGCS1Q01581 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HMGCS1Q01581 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.26□□□□□ -1.57
HMGCS1Q01581 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.26□□□□□ -1.57
HMGCS1Q01581 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
HMGCS1Q01581 YES1P1-201ENST00000418510 1628 ntBASIC5.26□□□□□ -1.57
HMGCS1Q01581 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HMGCS1Q01581 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.26□□□□□ -1.57
HMGCS1Q01581 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
HMGCS1Q01581 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMGCS1Q01581 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HMGCS1Q01581 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMGCS1Q01581 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMGCS1Q01581 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
HMGCS1Q01581 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
HMGCS1Q01581 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMGCS1Q01581 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.25□□□□□ -1.57
HMGCS1Q01581 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMGCS1Q01581 AL133173.1-201ENST00000423458 397 ntBASIC5.25□□□□□ -1.57
HMGCS1Q01581 BX119321.1-201ENST00000428912 797 ntBASIC5.25□□□□□ -1.57
HMGCS1Q01581 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.25□□□□□ -1.57
HMGCS1Q01581 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.25□□□□□ -1.57
HMGCS1Q01581 EEF1B2P6-201ENST00000445713 673 ntBASIC5.25□□□□□ -1.57
HMGCS1Q01581 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
HMGCS1Q01581 LRRC37A14P-201ENST00000452297 462 ntBASIC5.25□□□□□ -1.57
HMGCS1Q01581 UGT2A3P7-201ENST00000510485 734 ntBASIC5.25□□□□□ -1.57
HMGCS1Q01581 HMGN1P9-201ENST00000515212 298 ntBASIC5.25□□□□□ -1.57
HMGCS1Q01581 CYCSP22-201ENST00000517555 339 ntBASIC5.25□□□□□ -1.57
HMGCS1Q01581 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms