Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
AP3S2P59780 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
AP3S2P59780 AC092634.1-201ENST00000366505 199 ntBASIC4.7□□□□□ -1.66
AP3S2P59780 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
AP3S2P59780 AL009179.1-201ENST00000406085 265 ntBASIC4.7□□□□□ -1.66
AP3S2P59780 AC013268.2-201ENST00000420753 337 ntBASIC4.7□□□□□ -1.66
AP3S2P59780 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.7□□□□□ -1.66
AP3S2P59780 NANOGP4-201ENST00000427230 913 ntBASIC4.7□□□□□ -1.66
AP3S2P59780 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
AP3S2P59780 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.7□□□□□ -1.66
AP3S2P59780 AC107015.1-201ENST00000466902 747 ntBASIC4.7□□□□□ -1.66
AP3S2P59780 RN7SL269P-201ENST00000467795 305 ntBASIC4.7□□□□□ -1.66
AP3S2P59780 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.7□□□□□ -1.66
AP3S2P59780 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC4.7□□□□□ -1.66
AP3S2P59780 AC113367.2-201ENST00000505749 160 ntBASIC4.7□□□□□ -1.66
AP3S2P59780 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC4.7□□□□□ -1.66
AP3S2P59780 AC008868.1-201ENST00000509786 737 ntBASIC4.7□□□□□ -1.66
AP3S2P59780 Vault.2-201ENST00000516519 98 ntBASIC4.7□□□□□ -1.66
AP3S2P59780 SCARNA20.4-201ENST00000516969 131 ntBASIC4.7□□□□□ -1.66
AP3S2P59780 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC4.7□□□□□ -1.66
AP3S2P59780 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC4.7□□□□□ -1.66
AP3S2P59780 VDAC2P2-201ENST00000544463 901 ntBASIC4.7□□□□□ -1.66
AP3S2P59780 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC4.7□□□□□ -1.66
AP3S2P59780 AC096996.1-201ENST00000563813 325 ntBASIC4.7□□□□□ -1.66
AP3S2P59780 AC010547.7-201ENST00000570323 333 ntBASIC4.7□□□□□ -1.66
AP3S2P59780 MIR4732-201ENST00000581873 76 ntBASIC4.7□□□□□ -1.66
AP3S2P59780 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.7□□□□□ -1.66
AP3S2P59780 SMIM12P1-201ENST00000603004 274 ntBASIC4.7□□□□□ -1.66
AP3S2P59780 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC4.7□□□□□ -1.66
AP3S2P59780 RPSAP75-201ENST00000605848 301 ntBASIC4.7□□□□□ -1.66
AP3S2P59780 AL136131.3-201ENST00000607600 188 ntBASIC4.7□□□□□ -1.66
AP3S2P59780 AL512652.1-201ENST00000619006 500 ntBASIC4.7□□□□□ -1.66
AP3S2P59780 AC103564.3-201ENST00000621194 220 ntBASIC4.7□□□□□ -1.66
AP3S2P59780 AP003108.4-201ENST00000623917 878 ntBASIC4.7□□□□□ -1.66
AP3S2P59780 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
AP3S2P59780 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.7□□□□□ -1.66
AP3S2P59780 MAPK10-286ENST00000641208 8747 ntBASIC4.7□□□□□ -1.66
AP3S2P59780 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
AP3S2P59780 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
AP3S2P59780 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.7□□□□□ -1.66
AP3S2P59780 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
AP3S2P59780 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
AP3S2P59780 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
AP3S2P59780 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
AP3S2P59780 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
AP3S2P59780 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
AP3S2P59780 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
AP3S2P59780 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
AP3S2P59780 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
AP3S2P59780 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.69□□□□□ -1.66
AP3S2P59780 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
AP3S2P59780 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.69□□□□□ -1.66
AP3S2P59780 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
AP3S2P59780 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.69□□□□□ -1.66
AP3S2P59780 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
AP3S2P59780 RN7SKP224-201ENST00000364140 325 ntBASIC4.69□□□□□ -1.66
AP3S2P59780 RNA5SP85-201ENST00000365378 119 ntBASIC4.69□□□□□ -1.66
AP3S2P59780 RNU6-1320P-201ENST00000390838 107 ntBASIC4.69□□□□□ -1.66
AP3S2P59780 RNU6-1269P-201ENST00000391139 107 ntBASIC4.69□□□□□ -1.66
AP3S2P59780 AL359643.1-201ENST00000404109 423 ntBASIC4.69□□□□□ -1.66
AP3S2P59780 RN7SKP117-201ENST00000410175 264 ntBASIC4.69□□□□□ -1.66
AP3S2P59780 UBTFL2-201ENST00000411859 1191 ntBASIC4.69□□□□□ -1.66
AP3S2P59780 AL357752.1-201ENST00000412817 349 ntBASIC4.69□□□□□ -1.66
AP3S2P59780 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
AP3S2P59780 KCTD9P1-201ENST00000430462 1167 ntBASIC4.69□□□□□ -1.66
AP3S2P59780 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.69□□□□□ -1.66
AP3S2P59780 RPS10P14-201ENST00000440748 502 ntBASIC4.69□□□□□ -1.66
AP3S2P59780 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
AP3S2P59780 AC009244.1-201ENST00000450566 258 ntBASIC4.69□□□□□ -1.66
AP3S2P59780 AL450023.1-201ENST00000450868 751 ntBASIC4.69□□□□□ -1.66
AP3S2P59780 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.69□□□□□ -1.66
AP3S2P59780 RNU6-599P-201ENST00000459383 107 ntBASIC4.69□□□□□ -1.66
AP3S2P59780 RNU6-1193P-201ENST00000459461 107 ntBASIC4.69□□□□□ -1.66
AP3S2P59780 MTCO1P55-201ENST00000489829 745 ntBASIC4.69□□□□□ -1.66
AP3S2P59780 RN7SL346P-201ENST00000491561 294 ntBASIC4.69□□□□□ -1.66
AP3S2P59780 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.69□□□□□ -1.66
AP3S2P59780 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC4.69□□□□□ -1.66
AP3S2P59780 SNORA74.1-201ENST00000516320 180 ntBASIC4.69□□□□□ -1.66
AP3S2P59780 RN7SKP5-201ENST00000517045 272 ntBASIC4.69□□□□□ -1.66
AP3S2P59780 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC4.69□□□□□ -1.66
AP3S2P59780 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.69□□□□□ -1.66
AP3S2P59780 AC036111.2-201ENST00000533247 901 ntBASIC4.69□□□□□ -1.66
AP3S2P59780 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC4.69□□□□□ -1.66
AP3S2P59780 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC4.69□□□□□ -1.66
AP3S2P59780 AC122134.1-201ENST00000565664 1104 ntBASIC4.69□□□□□ -1.66
AP3S2P59780 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.69□□□□□ -1.66
AP3S2P59780 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.69□□□□□ -1.66
AP3S2P59780 AC036176.3-201ENST00000602456 418 ntBASIC4.69□□□□□ -1.66
AP3S2P59780 AL353807.4-201ENST00000604995 257 ntBASIC4.69□□□□□ -1.66
AP3S2P59780 AC092681.3-201ENST00000609463 678 ntBASIC4.69□□□□□ -1.66
AP3S2P59780 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
AP3S2P59780 RNU6-368P-201ENST00000620928 107 ntBASIC4.69□□□□□ -1.66
AP3S2P59780 RNU6-538P-201ENST00000622329 107 ntBASIC4.69□□□□□ -1.66
AP3S2P59780 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC4.69□□□□□ -1.66
AP3S2P59780 AP003499.2-201ENST00000624100 483 ntBASIC4.69□□□□□ -1.66
AP3S2P59780 AL355480.4-201ENST00000626823 69 ntBASIC4.69□□□□□ -1.66
AP3S2P59780 AC003973.3-201ENST00000624863 2822 ntBASIC4.69□□□□□ -1.66
AP3S2P59780 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.69□□□□□ -1.66
AP3S2P59780 AC093225.1-201ENST00000506867 1408 ntBASIC4.69□□□□□ -1.66
AP3S2P59780 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms