Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.91□□□□□ -1.3
RHBDL3P58872 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.91□□□□□ -1.3
RHBDL3P58872 MT-RNR2-201ENST00000387347 1559 ntBASIC6.91□□□□□ -1.3
RHBDL3P58872 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RHBDL3P58872 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.91□□□□□ -1.3
RHBDL3P58872 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RHBDL3P58872 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
RHBDL3P58872 AC123769.1-201ENST00000530992 3192 ntBASIC6.9□□□□□ -1.3
RHBDL3P58872 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RHBDL3P58872 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.9□□□□□ -1.3
RHBDL3P58872 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RHBDL3P58872 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
RHBDL3P58872 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
RHBDL3P58872 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RHBDL3P58872 RN7SKP162-201ENST00000363605 345 ntBASIC6.9□□□□□ -1.3
RHBDL3P58872 SNORD51.1-201ENST00000365405 77 ntBASIC6.9□□□□□ -1.3
RHBDL3P58872 RNA5SP131-201ENST00000365452 119 ntBASIC6.9□□□□□ -1.3
RHBDL3P58872 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
RHBDL3P58872 UBE2V1P15-201ENST00000407776 448 ntBASIC6.9□□□□□ -1.3
RHBDL3P58872 MIR1178-201ENST00000408396 91 ntBASIC6.9□□□□□ -1.3
RHBDL3P58872 RANP4-201ENST00000413361 655 ntBASIC6.9□□□□□ -1.3
RHBDL3P58872 OR2AT2P-201ENST00000413438 905 ntBASIC6.9□□□□□ -1.3
RHBDL3P58872 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC6.9□□□□□ -1.3
RHBDL3P58872 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.9□□□□□ -1.3
RHBDL3P58872 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RHBDL3P58872 AC015983.1-201ENST00000441577 373 ntBASIC6.9□□□□□ -1.3
RHBDL3P58872 MTND2P25-201ENST00000449028 610 ntBASIC6.9□□□□□ -1.3
RHBDL3P58872 HSPE1P22-201ENST00000456856 327 ntBASIC6.9□□□□□ -1.3
RHBDL3P58872 AC021205.1-201ENST00000468797 348 ntBASIC6.9□□□□□ -1.3
RHBDL3P58872 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.9□□□□□ -1.3
RHBDL3P58872 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.9□□□□□ -1.3
RHBDL3P58872 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.9□□□□□ -1.3
RHBDL3P58872 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.9□□□□□ -1.3
RHBDL3P58872 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.9□□□□□ -1.3
RHBDL3P58872 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.9□□□□□ -1.3
RHBDL3P58872 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.9□□□□□ -1.3
RHBDL3P58872 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.9□□□□□ -1.3
RHBDL3P58872 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.9□□□□□ -1.3
RHBDL3P58872 AC008115.3-201ENST00000614874 549 ntBASIC6.9□□□□□ -1.3
RHBDL3P58872 AL356094.1-201ENST00000624663 1212 ntBASIC6.9□□□□□ -1.3
RHBDL3P58872 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RHBDL3P58872 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
RHBDL3P58872 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
RHBDL3P58872 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.31
RHBDL3P58872 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
RHBDL3P58872 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
RHBDL3P58872 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
RHBDL3P58872 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RHBDL3P58872 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
RHBDL3P58872 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RHBDL3P58872 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RHBDL3P58872 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RHBDL3P58872 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.89□□□□□ -1.31
RHBDL3P58872 AC006065.1-201ENST00000422539 802 ntBASIC6.89□□□□□ -1.31
RHBDL3P58872 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.89□□□□□ -1.31
RHBDL3P58872 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.89□□□□□ -1.31
RHBDL3P58872 ZNF965P-201ENST00000432501 817 ntBASIC6.89□□□□□ -1.31
RHBDL3P58872 AL390119.1-201ENST00000440329 312 ntBASIC6.89□□□□□ -1.31
RHBDL3P58872 REG1CP-206ENST00000447469 496 ntBASIC6.89□□□□□ -1.31
RHBDL3P58872 AL157827.1-201ENST00000447622 132 ntBASIC6.89□□□□□ -1.31
RHBDL3P58872 NFU1-207ENST00000462320 558 ntTSL 4 BASIC6.89□□□□□ -1.31
RHBDL3P58872 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC6.89□□□□□ -1.31
RHBDL3P58872 RN7SL184P-201ENST00000488308 297 ntBASIC6.89□□□□□ -1.31
RHBDL3P58872 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC6.89□□□□□ -1.31
RHBDL3P58872 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC6.89□□□□□ -1.31
RHBDL3P58872 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC6.89□□□□□ -1.31
RHBDL3P58872 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.89□□□□□ -1.31
RHBDL3P58872 HSPE1P2-201ENST00000554777 306 ntBASIC6.89□□□□□ -1.31
RHBDL3P58872 AL049872.1-201ENST00000556323 322 ntBASIC6.89□□□□□ -1.31
RHBDL3P58872 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.89□□□□□ -1.31
RHBDL3P58872 AC015849.2-201ENST00000605738 409 ntBASIC6.89□□□□□ -1.31
RHBDL3P58872 AC007204.2-201ENST00000615022 616 ntBASIC6.89□□□□□ -1.31
RHBDL3P58872 AC074140.1-201ENST00000621617 208 ntBASIC6.89□□□□□ -1.31
RHBDL3P58872 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RHBDL3P58872 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RHBDL3P58872 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RHBDL3P58872 AC024341.1-201ENST00000526444 1552 ntBASIC6.89□□□□□ -1.31
RHBDL3P58872 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RHBDL3P58872 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.89□□□□□ -1.31
RHBDL3P58872 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
RHBDL3P58872 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RHBDL3P58872 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.89□□□□□ -1.31
RHBDL3P58872 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RHBDL3P58872 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
RHBDL3P58872 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.88□□□□□ -1.31
RHBDL3P58872 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RHBDL3P58872 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.88□□□□□ -1.31
RHBDL3P58872 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.88□□□□□ -1.31
RHBDL3P58872 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RHBDL3P58872 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RHBDL3P58872 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RHBDL3P58872 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
RHBDL3P58872 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RHBDL3P58872 IMMTP1-201ENST00000435590 2219 ntBASIC6.88□□□□□ -1.31
RHBDL3P58872 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
RHBDL3P58872 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RHBDL3P58872 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RHBDL3P58872 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
RHBDL3P58872 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.88□□□□□ -1.31
RHBDL3P58872 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms