Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.27□□□□□ -1.57
CDH11P55287 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.27□□□□□ -1.57
CDH11P55287 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.27□□□□□ -1.57
CDH11P55287 RPS7P3-201ENST00000443360 580 ntBASIC5.27□□□□□ -1.57
CDH11P55287 TRIM60P16-201ENST00000444048 694 ntBASIC5.27□□□□□ -1.57
CDH11P55287 MED28P3-201ENST00000444288 531 ntBASIC5.27□□□□□ -1.57
CDH11P55287 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.27□□□□□ -1.57
CDH11P55287 AC005077.1-201ENST00000449226 375 ntBASIC5.27□□□□□ -1.57
CDH11P55287 RN7SL197P-201ENST00000466981 299 ntBASIC5.27□□□□□ -1.57
CDH11P55287 AC092865.4-201ENST00000477936 615 ntBASIC5.27□□□□□ -1.57
CDH11P55287 AC104109.1-201ENST00000498563 436 ntBASIC5.27□□□□□ -1.57
CDH11P55287 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
CDH11P55287 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.27□□□□□ -1.57
CDH11P55287 SETP21-201ENST00000514799 892 ntBASIC5.27□□□□□ -1.57
CDH11P55287 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH11P55287 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH11P55287 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.27□□□□□ -1.57
CDH11P55287 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.27□□□□□ -1.57
CDH11P55287 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.27□□□□□ -1.57
CDH11P55287 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH11P55287 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH11P55287 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.27□□□□□ -1.57
CDH11P55287 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH11P55287 OOSP1P2-201ENST00000579644 351 ntBASIC5.27□□□□□ -1.57
CDH11P55287 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.27□□□□□ -1.57
CDH11P55287 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH11P55287 HIRAP1-201ENST00000605318 787 ntBASIC5.27□□□□□ -1.57
CDH11P55287 AC092953.2-201ENST00000608000 699 ntBASIC5.27□□□□□ -1.57
CDH11P55287 AL356752.1-201ENST00000615844 593 ntBASIC5.27□□□□□ -1.57
CDH11P55287 WBP1LP8-201ENST00000617401 327 ntBASIC5.27□□□□□ -1.57
CDH11P55287 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDH11P55287 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CDH11P55287 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH11P55287 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH11P55287 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.27□□□□□ -1.57
CDH11P55287 AP005435.3-201ENST00000531260 3198 ntBASIC5.27□□□□□ -1.57
CDH11P55287 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
CDH11P55287 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
CDH11P55287 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH11P55287 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH11P55287 AC009962.1-201ENST00000567327 3813 ntBASIC5.27□□□□□ -1.57
CDH11P55287 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDH11P55287 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.26□□□□□ -1.57
CDH11P55287 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.26□□□□□ -1.57
CDH11P55287 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH11P55287 AP004607.3-201ENST00000530354 3915 ntBASIC5.26□□□□□ -1.57
CDH11P55287 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH11P55287 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.26□□□□□ -1.57
CDH11P55287 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH11P55287 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH11P55287 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.26□□□□□ -1.57
CDH11P55287 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH11P55287 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDH11P55287 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH11P55287 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CDH11P55287 LYPLA1P3-201ENST00000402650 695 ntBASIC5.26□□□□□ -1.57
CDH11P55287 SLC20A1P1-201ENST00000413906 956 ntBASIC5.26□□□□□ -1.57
CDH11P55287 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH11P55287 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH11P55287 RNGTTP1-201ENST00000420965 728 ntBASIC5.26□□□□□ -1.57
CDH11P55287 AL445528.1-201ENST00000426330 420 ntBASIC5.26□□□□□ -1.57
CDH11P55287 VN1R21P-201ENST00000426703 765 ntBASIC5.26□□□□□ -1.57
CDH11P55287 MTND4P15-201ENST00000437913 1033 ntBASIC5.26□□□□□ -1.57
CDH11P55287 AL606490.8-201ENST00000441624 319 ntBASIC5.26□□□□□ -1.57
CDH11P55287 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH11P55287 C1DP3-201ENST00000455013 423 ntBASIC5.26□□□□□ -1.57
CDH11P55287 AC004129.2-201ENST00000457229 287 ntBASIC5.26□□□□□ -1.57
CDH11P55287 Y_RNA.667-201ENST00000516212 107 ntBASIC5.26□□□□□ -1.57
CDH11P55287 RNA5SP271-201ENST00000516700 88 ntBASIC5.26□□□□□ -1.57
CDH11P55287 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH11P55287 IGLVIV-64-201ENST00000518581 301 ntBASIC5.26□□□□□ -1.57
CDH11P55287 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.26□□□□□ -1.57
CDH11P55287 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.26□□□□□ -1.57
CDH11P55287 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.26□□□□□ -1.57
CDH11P55287 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH11P55287 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.26□□□□□ -1.57
CDH11P55287 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.26□□□□□ -1.57
CDH11P55287 AC092121.1-201ENST00000569452 202 ntBASIC5.26□□□□□ -1.57
CDH11P55287 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH11P55287 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.26□□□□□ -1.57
CDH11P55287 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.26□□□□□ -1.57
CDH11P55287 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.26□□□□□ -1.57
CDH11P55287 AC108673.3-201ENST00000609183 335 ntBASIC5.26□□□□□ -1.57
CDH11P55287 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.26□□□□□ -1.57
CDH11P55287 AL357562.1-201ENST00000624911 609 ntBASIC5.26□□□□□ -1.57
CDH11P55287 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH11P55287 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH11P55287 MFSD8-239ENST00000641590 2479 ntBASIC5.26□□□□□ -1.57
CDH11P55287 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CDH11P55287 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH11P55287 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH11P55287 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDH11P55287 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDH11P55287 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH11P55287 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH11P55287 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
CDH11P55287 AC097063.1-201ENST00000426714 1797 ntBASIC5.25□□□□□ -1.57
CDH11P55287 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.25□□□□□ -1.57
CDH11P55287 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CDH11P55287 PSG10P-201ENST00000501199 1500 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms