Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
NR1H2P55055 NPM1P29-201ENST00000483112 803 ntBASIC5.74□□□□□ -1.49
NR1H2P55055 RN7SL362P-201ENST00000494228 267 ntBASIC5.74□□□□□ -1.49
NR1H2P55055 AC106806.2-201ENST00000509365 500 ntBASIC5.74□□□□□ -1.49
NR1H2P55055 RN7SKP141-201ENST00000516167 338 ntBASIC5.74□□□□□ -1.49
NR1H2P55055 RNA5SP441-201ENST00000516809 88 ntBASIC5.74□□□□□ -1.49
NR1H2P55055 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NR1H2P55055 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.74□□□□□ -1.49
NR1H2P55055 VTA1P2-201ENST00000520205 911 ntBASIC5.74□□□□□ -1.49
NR1H2P55055 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.74□□□□□ -1.49
NR1H2P55055 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.74□□□□□ -1.49
NR1H2P55055 CYCSP25-201ENST00000525280 316 ntBASIC5.74□□□□□ -1.49
NR1H2P55055 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.74□□□□□ -1.49
NR1H2P55055 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.74□□□□□ -1.49
NR1H2P55055 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.74□□□□□ -1.49
NR1H2P55055 AC135983.3-201ENST00000528049 1226 ntBASIC5.74□□□□□ -1.49
NR1H2P55055 AC084121.1-201ENST00000533882 835 ntBASIC5.74□□□□□ -1.49
NR1H2P55055 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
NR1H2P55055 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5.74□□□□□ -1.49
NR1H2P55055 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.74□□□□□ -1.49
NR1H2P55055 AC068305.2-201ENST00000550567 1205 ntBASIC5.74□□□□□ -1.49
NR1H2P55055 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.74□□□□□ -1.49
NR1H2P55055 AC025918.2-201ENST00000558683 763 ntBASIC5.74□□□□□ -1.49
NR1H2P55055 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.74□□□□□ -1.49
NR1H2P55055 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.74□□□□□ -1.49
NR1H2P55055 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.74□□□□□ -1.49
NR1H2P55055 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NR1H2P55055 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.74□□□□□ -1.49
NR1H2P55055 AC010487.1-201ENST00000594408 1172 ntBASIC5.74□□□□□ -1.49
NR1H2P55055 ZNF92P2-201ENST00000600543 1059 ntBASIC5.74□□□□□ -1.49
NR1H2P55055 AC245052.7-201ENST00000601161 359 ntBASIC5.74□□□□□ -1.49
NR1H2P55055 AL049844.2-201ENST00000604280 628 ntBASIC5.74□□□□□ -1.49
NR1H2P55055 LSM1P2-201ENST00000604911 322 ntBASIC5.74□□□□□ -1.49
NR1H2P55055 AP001033.2-201ENST00000609701 1003 ntBASIC5.74□□□□□ -1.49
NR1H2P55055 AC110792.4-201ENST00000609843 298 ntBASIC5.74□□□□□ -1.49
NR1H2P55055 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.74□□□□□ -1.49
NR1H2P55055 AC096708.4-201ENST00000620563 552 ntBASIC5.74□□□□□ -1.49
NR1H2P55055 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NR1H2P55055 AL022311.1-201ENST00000623726 19416 ntBASIC5.74□□□□□ -1.49
NR1H2P55055 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
NR1H2P55055 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.74□□□□□ -1.49
NR1H2P55055 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NR1H2P55055 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NR1H2P55055 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
NR1H2P55055 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.74□□□□□ -1.49
NR1H2P55055 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NR1H2P55055 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
NR1H2P55055 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
NR1H2P55055 AC002525.1-201ENST00000624392 1622 ntBASIC5.74□□□□□ -1.49
NR1H2P55055 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NR1H2P55055 AL158152.1-201ENST00000602652 1435 ntBASIC5.74□□□□□ -1.49
NR1H2P55055 FBXL21-201ENST00000297158 1305 ntBASIC5.74□□□□□ -1.49
NR1H2P55055 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NR1H2P55055 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NR1H2P55055 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NR1H2P55055 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NR1H2P55055 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
NR1H2P55055 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NR1H2P55055 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.73□□□□□ -1.49
NR1H2P55055 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NR1H2P55055 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NR1H2P55055 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
NR1H2P55055 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NR1H2P55055 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NR1H2P55055 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NR1H2P55055 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NR1H2P55055 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NR1H2P55055 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NR1H2P55055 RNA5SP431-201ENST00000410312 120 ntBASIC5.73□□□□□ -1.49
NR1H2P55055 RN7SKP240-201ENST00000410583 375 ntBASIC5.73□□□□□ -1.49
NR1H2P55055 ARL2BPP3-201ENST00000421226 480 ntBASIC5.73□□□□□ -1.49
NR1H2P55055 REREP1Y-201ENST00000422655 198 ntBASIC5.73□□□□□ -1.49
NR1H2P55055 AC099782.1-201ENST00000425889 474 ntBASIC5.73□□□□□ -1.49
NR1H2P55055 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.73□□□□□ -1.49
NR1H2P55055 AL136231.1-201ENST00000429407 730 ntBASIC5.73□□□□□ -1.49
NR1H2P55055 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
NR1H2P55055 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.73□□□□□ -1.49
NR1H2P55055 REREP2Y-201ENST00000439103 200 ntBASIC5.73□□□□□ -1.49
NR1H2P55055 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.73□□□□□ -1.49
NR1H2P55055 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.73□□□□□ -1.49
NR1H2P55055 MED28P3-201ENST00000444288 531 ntBASIC5.73□□□□□ -1.49
NR1H2P55055 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.73□□□□□ -1.49
NR1H2P55055 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.73□□□□□ -1.49
NR1H2P55055 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.73□□□□□ -1.49
NR1H2P55055 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.73□□□□□ -1.49
NR1H2P55055 AC078857.1-201ENST00000469870 667 ntBASIC5.73□□□□□ -1.49
NR1H2P55055 AC022206.1-201ENST00000495947 347 ntBASIC5.73□□□□□ -1.49
NR1H2P55055 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.73□□□□□ -1.49
NR1H2P55055 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NR1H2P55055 CDH12P2-201ENST00000504393 298 ntBASIC5.73□□□□□ -1.49
NR1H2P55055 GLUD1P3-202ENST00000508551 200 ntBASIC5.73□□□□□ -1.49
NR1H2P55055 IMPA1P1-201ENST00000510718 842 ntBASIC5.73□□□□□ -1.49
NR1H2P55055 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.73□□□□□ -1.49
NR1H2P55055 AP004609.2-201ENST00000532177 190 ntBASIC5.73□□□□□ -1.49
NR1H2P55055 AC027026.1-201ENST00000532323 742 ntBASIC5.73□□□□□ -1.49
NR1H2P55055 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NR1H2P55055 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.73□□□□□ -1.49
NR1H2P55055 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.73□□□□□ -1.49
NR1H2P55055 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.73□□□□□ -1.49
NR1H2P55055 AC026826.3-201ENST00000561747 158 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms