Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LIMK2P53671 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LIMK2P53671 MIR133A2-201ENST00000347538 102 ntBASIC5.64□□□□□ -1.51
LIMK2P53671 AL159987.1-201ENST00000347911 293 ntBASIC5.64□□□□□ -1.51
LIMK2P53671 SNORA64.1-201ENST00000362600 132 ntBASIC5.64□□□□□ -1.51
LIMK2P53671 U3.28-201ENST00000391249 210 ntBASIC5.64□□□□□ -1.51
LIMK2P53671 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LIMK2P53671 AL391361.1-201ENST00000405580 489 ntBASIC5.64□□□□□ -1.51
LIMK2P53671 AC017078.1-201ENST00000416146 368 ntBASIC5.64□□□□□ -1.51
LIMK2P53671 GTF3AP1-201ENST00000416942 1004 ntBASIC5.64□□□□□ -1.51
LIMK2P53671 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.64□□□□□ -1.51
LIMK2P53671 AC009784.1-201ENST00000426484 460 ntBASIC5.64□□□□□ -1.51
LIMK2P53671 HMGB3P24-201ENST00000433260 622 ntBASIC5.64□□□□□ -1.51
LIMK2P53671 AL359265.1-201ENST00000440296 795 ntBASIC5.64□□□□□ -1.51
LIMK2P53671 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.64□□□□□ -1.51
LIMK2P53671 AC073909.1-201ENST00000447112 999 ntBASIC5.64□□□□□ -1.51
LIMK2P53671 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.64□□□□□ -1.51
LIMK2P53671 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.64□□□□□ -1.51
LIMK2P53671 RPS26P39-201ENST00000469206 341 ntBASIC5.64□□□□□ -1.51
LIMK2P53671 HMGB3P14-201ENST00000494195 599 ntBASIC5.64□□□□□ -1.51
LIMK2P53671 RPSAP51-201ENST00000497462 645 ntBASIC5.64□□□□□ -1.51
LIMK2P53671 RN7SL466P-201ENST00000497546 295 ntBASIC5.64□□□□□ -1.51
LIMK2P53671 AC138866.2-201ENST00000508650 584 ntBASIC5.64□□□□□ -1.51
LIMK2P53671 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.64□□□□□ -1.51
LIMK2P53671 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.64□□□□□ -1.51
LIMK2P53671 SEPT10P1-201ENST00000517342 1162 ntBASIC5.64□□□□□ -1.51
LIMK2P53671 PMS2P3-207ENST00000529061 717 ntBASIC5.64□□□□□ -1.51
LIMK2P53671 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.64□□□□□ -1.51
LIMK2P53671 IGBP1P1-201ENST00000554337 1009 ntBASIC5.64□□□□□ -1.51
LIMK2P53671 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.64□□□□□ -1.51
LIMK2P53671 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.64□□□□□ -1.51
LIMK2P53671 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.64□□□□□ -1.51
LIMK2P53671 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.64□□□□□ -1.51
LIMK2P53671 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.64□□□□□ -1.51
LIMK2P53671 NPM1P45-201ENST00000583151 559 ntBASIC5.64□□□□□ -1.51
LIMK2P53671 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.64□□□□□ -1.51
LIMK2P53671 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.64□□□□□ -1.51
LIMK2P53671 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.64□□□□□ -1.51
LIMK2P53671 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.64□□□□□ -1.51
LIMK2P53671 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.64□□□□□ -1.51
LIMK2P53671 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.64□□□□□ -1.51
LIMK2P53671 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.64□□□□□ -1.51
LIMK2P53671 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.64□□□□□ -1.51
LIMK2P53671 AC090607.5-201ENST00000615692 224 ntBASIC5.64□□□□□ -1.51
LIMK2P53671 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LIMK2P53671 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.64□□□□□ -1.51
LIMK2P53671 AC005261.2-201ENST00000593427 4258 ntBASIC5.64□□□□□ -1.51
LIMK2P53671 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LIMK2P53671 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LIMK2P53671 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.64□□□□□ -1.51
LIMK2P53671 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
LIMK2P53671 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
LIMK2P53671 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
LIMK2P53671 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LIMK2P53671 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LIMK2P53671 GTF2IP4-201ENST00000453092 2054 ntBASIC5.63□□□□□ -1.51
LIMK2P53671 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LIMK2P53671 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
LIMK2P53671 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LIMK2P53671 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
LIMK2P53671 ICE2P1-201ENST00000512800 1849 ntBASIC5.63□□□□□ -1.51
LIMK2P53671 AC068870.1-201ENST00000563737 2455 ntBASIC5.63□□□□□ -1.51
LIMK2P53671 RNA5SP132-201ENST00000364725 118 ntBASIC5.63□□□□□ -1.51
LIMK2P53671 RNA5SP30-201ENST00000365552 115 ntBASIC5.63□□□□□ -1.51
LIMK2P53671 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
LIMK2P53671 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LIMK2P53671 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.63□□□□□ -1.51
LIMK2P53671 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.63□□□□□ -1.51
LIMK2P53671 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC5.63□□□□□ -1.51
LIMK2P53671 AL662874.1-201ENST00000426065 230 ntBASIC5.63□□□□□ -1.51
LIMK2P53671 AL022331.1-201ENST00000429025 477 ntBASIC5.63□□□□□ -1.51
LIMK2P53671 Z84478.1-201ENST00000438230 1219 ntBASIC5.63□□□□□ -1.51
LIMK2P53671 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.63□□□□□ -1.51
LIMK2P53671 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.63□□□□□ -1.51
LIMK2P53671 AC022215.1-201ENST00000481770 362 ntBASIC5.63□□□□□ -1.51
LIMK2P53671 RPL32P33-201ENST00000487023 394 ntBASIC5.63□□□□□ -1.51
LIMK2P53671 RN7SL629P-201ENST00000489622 285 ntBASIC5.63□□□□□ -1.51
LIMK2P53671 AC009120.1-201ENST00000493458 473 ntBASIC5.63□□□□□ -1.51
LIMK2P53671 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.63□□□□□ -1.51
LIMK2P53671 RN7SKP5-201ENST00000517045 272 ntBASIC5.63□□□□□ -1.51
LIMK2P53671 SNORA43.3-201ENST00000517240 103 ntBASIC5.63□□□□□ -1.51
LIMK2P53671 OR4A43P-201ENST00000532938 908 ntBASIC5.63□□□□□ -1.51
LIMK2P53671 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.63□□□□□ -1.51
LIMK2P53671 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.63□□□□□ -1.51
LIMK2P53671 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.63□□□□□ -1.51
LIMK2P53671 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.63□□□□□ -1.51
LIMK2P53671 AL162574.1-201ENST00000615702 950 ntBASIC5.63□□□□□ -1.51
LIMK2P53671 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.63□□□□□ -1.51
LIMK2P53671 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.63□□□□□ -1.51
LIMK2P53671 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LIMK2P53671 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LIMK2P53671 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.63□□□□□ -1.51
LIMK2P53671 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LIMK2P53671 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
LIMK2P53671 AC018809.2-201ENST00000602436 3823 ntBASIC5.63□□□□□ -1.51
LIMK2P53671 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LIMK2P53671 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LIMK2P53671 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LIMK2P53671 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
LIMK2P53671 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms