Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC4.89□□□□□ -1.63
HCFC1P51610 AL139128.1-201ENST00000413921 941 ntBASIC4.89□□□□□ -1.63
HCFC1P51610 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.89□□□□□ -1.63
HCFC1P51610 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.89□□□□□ -1.63
HCFC1P51610 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.89□□□□□ -1.63
HCFC1P51610 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC4.89□□□□□ -1.63
HCFC1P51610 AL590762.4-201ENST00000425885 253 ntBASIC4.89□□□□□ -1.63
HCFC1P51610 RPL34P27-201ENST00000428810 349 ntBASIC4.89□□□□□ -1.63
HCFC1P51610 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.89□□□□□ -1.63
HCFC1P51610 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC4.89□□□□□ -1.63
HCFC1P51610 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC4.89□□□□□ -1.63
HCFC1P51610 AC090638.1-201ENST00000498296 909 ntBASIC4.89□□□□□ -1.63
HCFC1P51610 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC4.89□□□□□ -1.63
HCFC1P51610 AP001804.1-201ENST00000526868 919 ntBASIC4.89□□□□□ -1.63
HCFC1P51610 AC022832.1-201ENST00000530718 645 ntBASIC4.89□□□□□ -1.63
HCFC1P51610 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
HCFC1P51610 NMNAT1P5-201ENST00000559657 841 ntBASIC4.89□□□□□ -1.63
HCFC1P51610 AC015720.2-201ENST00000567709 334 ntBASIC4.89□□□□□ -1.63
HCFC1P51610 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC4.89□□□□□ -1.63
HCFC1P51610 AP002799.1-201ENST00000623552 423 ntBASIC4.89□□□□□ -1.63
HCFC1P51610 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC4.89□□□□□ -1.63
HCFC1P51610 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.89□□□□□ -1.63
HCFC1P51610 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
HCFC1P51610 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC4.89□□□□□ -1.63
HCFC1P51610 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
HCFC1P51610 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HCFC1P51610 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
HCFC1P51610 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HCFC1P51610 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
HCFC1P51610 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HCFC1P51610 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC4.88□□□□□ -1.63
HCFC1P51610 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HCFC1P51610 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
HCFC1P51610 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HCFC1P51610 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
HCFC1P51610 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC4.88□□□□□ -1.63
HCFC1P51610 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HCFC1P51610 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC4.88□□□□□ -1.63
HCFC1P51610 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
HCFC1P51610 AC112255.1-201ENST00000624070 2493 ntBASIC4.88□□□□□ -1.63
HCFC1P51610 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HCFC1P51610 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HCFC1P51610 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HCFC1P51610 JPX-212ENST00000639185 9658 ntTSL 5 BASIC4.88□□□□□ -1.63
HCFC1P51610 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
HCFC1P51610 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HCFC1P51610 RPL23AP17-201ENST00000401064 499 ntBASIC4.88□□□□□ -1.63
HCFC1P51610 AL121977.1-201ENST00000401636 979 ntBASIC4.88□□□□□ -1.63
HCFC1P51610 PA2G4P6-201ENST00000438325 1197 ntBASIC4.88□□□□□ -1.63
HCFC1P51610 AC105399.1-202ENST00000447303 205 ntBASIC4.88□□□□□ -1.63
HCFC1P51610 FAR2P1-206ENST00000449736 709 ntBASIC4.88□□□□□ -1.63
HCFC1P51610 RPL35AP28-201ENST00000459730 331 ntBASIC4.88□□□□□ -1.63
HCFC1P51610 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.88□□□□□ -1.63
HCFC1P51610 AC093890.1-201ENST00000502554 540 ntBASIC4.88□□□□□ -1.63
HCFC1P51610 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.88□□□□□ -1.63
HCFC1P51610 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC4.88□□□□□ -1.63
HCFC1P51610 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.88□□□□□ -1.63
HCFC1P51610 RNU6-941P-201ENST00000516346 108 ntBASIC4.88□□□□□ -1.63
HCFC1P51610 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
HCFC1P51610 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.88□□□□□ -1.63
HCFC1P51610 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC4.88□□□□□ -1.63
HCFC1P51610 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
HCFC1P51610 AC100827.5-201ENST00000615883 426 ntBASIC4.88□□□□□ -1.63
HCFC1P51610 HSPA8P18-201ENST00000439846 1928 ntBASIC4.88□□□□□ -1.63
HCFC1P51610 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC4.88□□□□□ -1.63
HCFC1P51610 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
HCFC1P51610 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
HCFC1P51610 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.88□□□□□ -1.63
HCFC1P51610 AC007938.2-201ENST00000604666 2634 ntBASIC4.88□□□□□ -1.63
HCFC1P51610 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC4.88□□□□□ -1.63
HCFC1P51610 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
HCFC1P51610 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.88□□□□□ -1.63
HCFC1P51610 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HCFC1P51610 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
HCFC1P51610 RNU1-59P-201ENST00000364829 162 ntBASIC4.87□□□□□ -1.63
HCFC1P51610 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC4.87□□□□□ -1.63
HCFC1P51610 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HCFC1P51610 RNU6-316P-201ENST00000391027 107 ntBASIC4.87□□□□□ -1.63
HCFC1P51610 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HCFC1P51610 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.87□□□□□ -1.63
HCFC1P51610 LDHAP2-201ENST00000437325 985 ntBASIC4.87□□□□□ -1.63
HCFC1P51610 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC4.87□□□□□ -1.63
HCFC1P51610 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.87□□□□□ -1.63
HCFC1P51610 HIGD1AP8-201ENST00000453927 274 ntBASIC4.87□□□□□ -1.63
HCFC1P51610 snoU13.29-201ENST00000459370 104 ntBASIC4.87□□□□□ -1.63
HCFC1P51610 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.87□□□□□ -1.63
HCFC1P51610 RNU6-362P-201ENST00000516736 90 ntBASIC4.87□□□□□ -1.63
HCFC1P51610 CDH12P4-201ENST00000517835 295 ntBASIC4.87□□□□□ -1.63
HCFC1P51610 CDH12P3-201ENST00000517935 295 ntBASIC4.87□□□□□ -1.63
HCFC1P51610 CDH12P1-201ENST00000518435 295 ntBASIC4.87□□□□□ -1.63
HCFC1P51610 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.87□□□□□ -1.63
HCFC1P51610 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC4.87□□□□□ -1.63
HCFC1P51610 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
HCFC1P51610 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC4.87□□□□□ -1.63
HCFC1P51610 MIR4480-201ENST00000582492 71 ntBASIC4.87□□□□□ -1.63
HCFC1P51610 U1.25-201ENST00000614085 162 ntBASIC4.87□□□□□ -1.63
HCFC1P51610 U1.34-201ENST00000618578 162 ntBASIC4.87□□□□□ -1.63
HCFC1P51610 U1.31-201ENST00000620022 160 ntBASIC4.87□□□□□ -1.63
HCFC1P51610 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC4.87□□□□□ -1.63
HCFC1P51610 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms