Protein–RNA interactions for Protein: P35548

MSX2, Homeobox protein MSX-2, humanhuman

Predicted RBP Predictions only

Length 267 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2P35548 GAPDHP33-201ENST00000443168 1013 ntBASIC6.02□□□□□ -1.45
MSX2P35548 SNRPBP1-201ENST00000443634 282 ntBASIC6.02□□□□□ -1.45
MSX2P35548 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.02□□□□□ -1.45
MSX2P35548 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC6.02□□□□□ -1.45
MSX2P35548 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
MSX2P35548 NPM1P13-201ENST00000452663 865 ntBASIC6.02□□□□□ -1.45
MSX2P35548 RPS27AP8-201ENST00000452665 445 ntBASIC6.02□□□□□ -1.45
MSX2P35548 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC6.02□□□□□ -1.45
MSX2P35548 SRP68P2-201ENST00000456184 254 ntBASIC6.02□□□□□ -1.45
MSX2P35548 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC6.02□□□□□ -1.45
MSX2P35548 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.02□□□□□ -1.45
MSX2P35548 RN7SL145P-201ENST00000469955 296 ntBASIC6.02□□□□□ -1.45
MSX2P35548 AC105918.1-201ENST00000474399 838 ntBASIC6.02□□□□□ -1.45
MSX2P35548 AC022336.1-201ENST00000475510 337 ntBASIC6.02□□□□□ -1.45
MSX2P35548 AC114728.1-201ENST00000488289 483 ntBASIC6.02□□□□□ -1.45
MSX2P35548 AC018639.1-201ENST00000492994 442 ntBASIC6.02□□□□□ -1.45
MSX2P35548 RPF2P2-201ENST00000504693 896 ntBASIC6.02□□□□□ -1.45
MSX2P35548 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
MSX2P35548 MTCO3P7-201ENST00000510008 774 ntBASIC6.02□□□□□ -1.45
MSX2P35548 AC093755.1-201ENST00000512950 1023 ntBASIC6.02□□□□□ -1.45
MSX2P35548 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.02□□□□□ -1.45
MSX2P35548 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC6.02□□□□□ -1.45
MSX2P35548 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC6.02□□□□□ -1.45
MSX2P35548 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
MSX2P35548 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.02□□□□□ -1.45
MSX2P35548 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC6.02□□□□□ -1.45
MSX2P35548 AC008015.1-201ENST00000555505 465 ntBASIC6.02□□□□□ -1.45
MSX2P35548 AL121839.1-201ENST00000556233 1185 ntBASIC6.02□□□□□ -1.45
MSX2P35548 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC6.02□□□□□ -1.45
MSX2P35548 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC6.02□□□□□ -1.45
MSX2P35548 MIR378C-201ENST00000578683 81 ntBASIC6.02□□□□□ -1.45
MSX2P35548 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC6.02□□□□□ -1.45
MSX2P35548 AC011193.2-201ENST00000582638 367 ntBASIC6.02□□□□□ -1.45
MSX2P35548 AC090616.1-201ENST00000583895 447 ntBASIC6.02□□□□□ -1.45
MSX2P35548 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.02□□□□□ -1.45
MSX2P35548 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC6.02□□□□□ -1.45
MSX2P35548 AC073333.2-201ENST00000603589 769 ntBASIC6.02□□□□□ -1.45
MSX2P35548 AC107304.1-201ENST00000604229 296 ntBASIC6.02□□□□□ -1.45
MSX2P35548 AC105129.3-201ENST00000605455 485 ntBASIC6.02□□□□□ -1.45
MSX2P35548 OR2AS2P-201ENST00000606902 342 ntBASIC6.02□□□□□ -1.45
MSX2P35548 AC245100.7-201ENST00000609678 442 ntBASIC6.02□□□□□ -1.45
MSX2P35548 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
MSX2P35548 AC005332.10-201ENST00000612725 619 ntBASIC6.02□□□□□ -1.45
MSX2P35548 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC6.02□□□□□ -1.45
MSX2P35548 pRNA.9-201ENST00000618609 89 ntBASIC6.02□□□□□ -1.45
MSX2P35548 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC6.02□□□□□ -1.45
MSX2P35548 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.02□□□□□ -1.45
MSX2P35548 MIR1322-201ENST00000638013 71 ntBASIC6.02□□□□□ -1.45
MSX2P35548 AC116667.2-201ENST00000641075 823 ntBASIC6.02□□□□□ -1.45
MSX2P35548 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
MSX2P35548 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
MSX2P35548 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
MSX2P35548 AL359715.3-201ENST00000569267 2123 ntBASIC6.02□□□□□ -1.45
MSX2P35548 AC025263.3-201ENST00000622965 1396 ntBASIC6.02□□□□□ -1.45
MSX2P35548 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.02□□□□□ -1.45
MSX2P35548 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
MSX2P35548 ZNF90P1-201ENST00000480493 1951 ntBASIC6.02□□□□□ -1.45
MSX2P35548 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.02□□□□□ -1.45
MSX2P35548 AC092692.1-201ENST00000623625 2595 ntBASIC6.02□□□□□ -1.45
MSX2P35548 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
MSX2P35548 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
MSX2P35548 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.01□□□□□ -1.45
MSX2P35548 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC6.01□□□□□ -1.45
MSX2P35548 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
MSX2P35548 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
MSX2P35548 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.01□□□□□ -1.45
MSX2P35548 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
MSX2P35548 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
MSX2P35548 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
MSX2P35548 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
MSX2P35548 SNORD116-12-201ENST00000384468 92 ntBASIC6.01□□□□□ -1.45
MSX2P35548 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
MSX2P35548 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
MSX2P35548 AL117344.1-201ENST00000407196 616 ntBASIC6.01□□□□□ -1.45
MSX2P35548 MEG8-201ENST00000414488 800 ntTSL 3 BASIC6.01□□□□□ -1.45
MSX2P35548 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.01□□□□□ -1.45
MSX2P35548 MTCO1P21-201ENST00000416634 589 ntBASIC6.01□□□□□ -1.45
MSX2P35548 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
MSX2P35548 AL929472.1-201ENST00000417484 429 ntBASIC6.01□□□□□ -1.45
MSX2P35548 AL360013.1-201ENST00000419031 858 ntBASIC6.01□□□□□ -1.45
MSX2P35548 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.01□□□□□ -1.45
MSX2P35548 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC6.01□□□□□ -1.45
MSX2P35548 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.01□□□□□ -1.45
MSX2P35548 AL160175.1-201ENST00000428124 247 ntBASIC6.01□□□□□ -1.45
MSX2P35548 AC007563.3-201ENST00000433233 371 ntBASIC6.01□□□□□ -1.45
MSX2P35548 UBE2D3P4-201ENST00000441973 436 ntBASIC6.01□□□□□ -1.45
MSX2P35548 RPS6P2-201ENST00000454208 705 ntBASIC6.01□□□□□ -1.45
MSX2P35548 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.01□□□□□ -1.45
MSX2P35548 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
MSX2P35548 CBX5P1-201ENST00000468470 561 ntBASIC6.01□□□□□ -1.45
MSX2P35548 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC6.01□□□□□ -1.45
MSX2P35548 RPL19P11-201ENST00000495944 589 ntBASIC6.01□□□□□ -1.45
MSX2P35548 AK4P6-201ENST00000505168 528 ntBASIC6.01□□□□□ -1.45
MSX2P35548 RFPL4AP3-201ENST00000515267 345 ntBASIC6.01□□□□□ -1.45
MSX2P35548 RN7SKP242-201ENST00000515967 289 ntBASIC6.01□□□□□ -1.45
MSX2P35548 OR8I1P-201ENST00000529291 931 ntBASIC6.01□□□□□ -1.45
MSX2P35548 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC6.01□□□□□ -1.45
MSX2P35548 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.01□□□□□ -1.45
MSX2P35548 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.01□□□□□ -1.45
MSX2P35548 AC008147.3-201ENST00000548666 354 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms