Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTLA4P16410 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTLA4P16410 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.81□□□□□ -1.64
CTLA4P16410 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.81□□□□□ -1.64
CTLA4P16410 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTLA4P16410 RNA5SP284-201ENST00000384547 118 ntBASIC4.81□□□□□ -1.64
CTLA4P16410 RNA5SP241-201ENST00000391326 114 ntBASIC4.81□□□□□ -1.64
CTLA4P16410 OR6E1P-201ENST00000414424 923 ntBASIC4.81□□□□□ -1.64
CTLA4P16410 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CTLA4P16410 RPL7AP49-201ENST00000429522 581 ntBASIC4.81□□□□□ -1.64
CTLA4P16410 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTLA4P16410 AL591438.1-201ENST00000433508 581 ntBASIC4.81□□□□□ -1.64
CTLA4P16410 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.81□□□□□ -1.64
CTLA4P16410 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.81□□□□□ -1.64
CTLA4P16410 AL035090.1-201ENST00000454835 332 ntBASIC4.81□□□□□ -1.64
CTLA4P16410 AC084754.1-201ENST00000463466 464 ntBASIC4.81□□□□□ -1.64
CTLA4P16410 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CTLA4P16410 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.81□□□□□ -1.64
CTLA4P16410 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.81□□□□□ -1.64
CTLA4P16410 LDHC-203ENST00000535809 757 ntTSL 5 BASIC4.81□□□□□ -1.64
CTLA4P16410 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.81□□□□□ -1.64
CTLA4P16410 AC010547.6-201ENST00000571789 193 ntBASIC4.81□□□□□ -1.64
CTLA4P16410 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.81□□□□□ -1.64
CTLA4P16410 AC007683.2-201ENST00000624681 714 ntBASIC4.81□□□□□ -1.64
CTLA4P16410 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.81□□□□□ -1.64
CTLA4P16410 AC099654.11-201ENST00000638857 294 ntBASIC4.81□□□□□ -1.64
CTLA4P16410 OR8A1-204ENST00000642111 1145 ntBASIC4.81□□□□□ -1.64
CTLA4P16410 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.81□□□□□ -1.64
CTLA4P16410 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.81□□□□□ -1.64
CTLA4P16410 XKRY2-202ENST00000623874 1581 ntBASIC4.81□□□□□ -1.64
CTLA4P16410 XKRY-202ENST00000624960 1581 ntBASIC4.81□□□□□ -1.64
CTLA4P16410 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTLA4P16410 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.81□□□□□ -1.64
CTLA4P16410 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTLA4P16410 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTLA4P16410 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
CTLA4P16410 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTLA4P16410 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CTLA4P16410 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTLA4P16410 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTLA4P16410 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTLA4P16410 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTLA4P16410 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTLA4P16410 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CTLA4P16410 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
CTLA4P16410 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTLA4P16410 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTLA4P16410 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTLA4P16410 RNU4-2-201ENST00000365668 141 ntBASIC4.8□□□□□ -1.64
CTLA4P16410 RNA5SP122-201ENST00000384457 108 ntBASIC4.8□□□□□ -1.64
CTLA4P16410 NACAP7-201ENST00000407371 609 ntBASIC4.8□□□□□ -1.64
CTLA4P16410 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTLA4P16410 HYALP1-201ENST00000417674 1279 ntBASIC4.8□□□□□ -1.64
CTLA4P16410 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.8□□□□□ -1.64
CTLA4P16410 AC017019.1-201ENST00000426129 261 ntBASIC4.8□□□□□ -1.64
CTLA4P16410 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.8□□□□□ -1.64
CTLA4P16410 RPL12P17-201ENST00000432393 498 ntBASIC4.8□□□□□ -1.64
CTLA4P16410 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC4.8□□□□□ -1.64
CTLA4P16410 AC002504.1-201ENST00000438281 691 ntBASIC4.8□□□□□ -1.64
CTLA4P16410 AC016772.1-201ENST00000444170 1261 ntBASIC4.8□□□□□ -1.64
CTLA4P16410 AC073109.1-201ENST00000445066 978 ntBASIC4.8□□□□□ -1.64
CTLA4P16410 AC090804.1-201ENST00000448870 490 ntBASIC4.8□□□□□ -1.64
CTLA4P16410 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.8□□□□□ -1.64
CTLA4P16410 CBX1P2-201ENST00000453841 458 ntBASIC4.8□□□□□ -1.64
CTLA4P16410 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CTLA4P16410 AC092754.1-201ENST00000472975 479 ntBASIC4.8□□□□□ -1.64
CTLA4P16410 AC007998.1-201ENST00000474156 672 ntBASIC4.8□□□□□ -1.64
CTLA4P16410 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.8□□□□□ -1.64
CTLA4P16410 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.8□□□□□ -1.64
CTLA4P16410 AC022826.1-201ENST00000519383 805 ntBASIC4.8□□□□□ -1.64
CTLA4P16410 AC092709.1-201ENST00000521355 1045 ntBASIC4.8□□□□□ -1.64
CTLA4P16410 AP004609.2-201ENST00000532177 190 ntBASIC4.8□□□□□ -1.64
CTLA4P16410 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.8□□□□□ -1.64
CTLA4P16410 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.8□□□□□ -1.64
CTLA4P16410 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.8□□□□□ -1.64
CTLA4P16410 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.8□□□□□ -1.64
CTLA4P16410 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.8□□□□□ -1.64
CTLA4P16410 AL583832.1-201ENST00000603227 784 ntBASIC4.8□□□□□ -1.64
CTLA4P16410 AC099654.6-201ENST00000636487 512 ntBASIC4.8□□□□□ -1.64
CTLA4P16410 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CTLA4P16410 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CTLA4P16410 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTLA4P16410 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
CTLA4P16410 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTLA4P16410 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTLA4P16410 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTLA4P16410 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
CTLA4P16410 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CTLA4P16410 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.79□□□□□ -1.64
CTLA4P16410 AL022311.1-201ENST00000623726 19416 ntBASIC4.79□□□□□ -1.64
CTLA4P16410 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CTLA4P16410 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CTLA4P16410 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTLA4P16410 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CTLA4P16410 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTLA4P16410 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CTLA4P16410 RNA5SP510-201ENST00000364697 99 ntBASIC4.79□□□□□ -1.64
CTLA4P16410 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.79□□□□□ -1.64
CTLA4P16410 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CTLA4P16410 TNPO1P1-201ENST00000423641 1138 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms