Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC091167.5-201ENST00000605689 894 ntBASIC5.22□□□□□ -1.57
MT-ND1P03886 AC067838.1-201ENST00000606064 577 ntBASIC5.22□□□□□ -1.57
MT-ND1P03886 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.22□□□□□ -1.57
MT-ND1P03886 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.22□□□□□ -1.57
MT-ND1P03886 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
MT-ND1P03886 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.22□□□□□ -1.57
MT-ND1P03886 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
MT-ND1P03886 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
MT-ND1P03886 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.22□□□□□ -1.57
MT-ND1P03886 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
MT-ND1P03886 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.21□□□□□ -1.57
MT-ND1P03886 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.21□□□□□ -1.57
MT-ND1P03886 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
MT-ND1P03886 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
MT-ND1P03886 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
MT-ND1P03886 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
MT-ND1P03886 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
MT-ND1P03886 PDZK1P1-202ENST00000425209 1350 ntBASIC5.21□□□□□ -1.58
MT-ND1P03886 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.21□□□□□ -1.58
MT-ND1P03886 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
MT-ND1P03886 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.21□□□□□ -1.58
MT-ND1P03886 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.21□□□□□ -1.58
MT-ND1P03886 GAPDHP24-201ENST00000328713 983 ntBASIC5.21□□□□□ -1.58
MT-ND1P03886 Y_RNA.62-201ENST00000362840 99 ntBASIC5.21□□□□□ -1.58
MT-ND1P03886 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.21□□□□□ -1.58
MT-ND1P03886 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
MT-ND1P03886 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
MT-ND1P03886 AL672167.2-201ENST00000377164 879 ntBASIC5.21□□□□□ -1.58
MT-ND1P03886 RNA5SP241-201ENST00000391326 114 ntBASIC5.21□□□□□ -1.58
MT-ND1P03886 PPIAP9-201ENST00000403866 498 ntBASIC5.21□□□□□ -1.58
MT-ND1P03886 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.21□□□□□ -1.58
MT-ND1P03886 SEPT7P8-201ENST00000413308 775 ntBASIC5.21□□□□□ -1.58
MT-ND1P03886 MRPL53P1-201ENST00000414323 319 ntBASIC5.21□□□□□ -1.58
MT-ND1P03886 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.21□□□□□ -1.58
MT-ND1P03886 AC117434.1-201ENST00000419971 836 ntBASIC5.21□□□□□ -1.58
MT-ND1P03886 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.21□□□□□ -1.58
MT-ND1P03886 BX284632.2-201ENST00000421091 399 ntBASIC5.21□□□□□ -1.58
MT-ND1P03886 RFESDP1-201ENST00000422350 461 ntBASIC5.21□□□□□ -1.58
MT-ND1P03886 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
MT-ND1P03886 AL512605.1-202ENST00000441919 381 ntBASIC5.21□□□□□ -1.58
MT-ND1P03886 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
MT-ND1P03886 AL359955.2-201ENST00000445380 353 ntBASIC5.21□□□□□ -1.58
MT-ND1P03886 EEF1B2P3-201ENST00000447718 678 ntBASIC5.21□□□□□ -1.58
MT-ND1P03886 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
MT-ND1P03886 ATP5LP5-201ENST00000483050 299 ntBASIC5.21□□□□□ -1.58
MT-ND1P03886 RN7SL193P-201ENST00000491708 276 ntBASIC5.21□□□□□ -1.58
MT-ND1P03886 RN7SL57P-201ENST00000493687 290 ntBASIC5.21□□□□□ -1.58
MT-ND1P03886 NPM1P52-201ENST00000518264 846 ntBASIC5.21□□□□□ -1.58
MT-ND1P03886 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.21□□□□□ -1.58
MT-ND1P03886 AP001804.2-201ENST00000533932 910 ntBASIC5.21□□□□□ -1.58
MT-ND1P03886 HSPE1P2-201ENST00000554777 306 ntBASIC5.21□□□□□ -1.58
MT-ND1P03886 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.21□□□□□ -1.58
MT-ND1P03886 AC006530.1-201ENST00000555980 571 ntBASIC5.21□□□□□ -1.58
MT-ND1P03886 AL845552.1-201ENST00000556820 323 ntBASIC5.21□□□□□ -1.58
MT-ND1P03886 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.21□□□□□ -1.58
MT-ND1P03886 AL356801.1-201ENST00000559320 294 ntBASIC5.21□□□□□ -1.58
MT-ND1P03886 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.21□□□□□ -1.58
MT-ND1P03886 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.21□□□□□ -1.58
MT-ND1P03886 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.21□□□□□ -1.58
MT-ND1P03886 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC5.21□□□□□ -1.58
MT-ND1P03886 COX6CP7-201ENST00000597056 208 ntBASIC5.21□□□□□ -1.58
MT-ND1P03886 AC009237.13-201ENST00000603193 276 ntBASIC5.21□□□□□ -1.58
MT-ND1P03886 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.21□□□□□ -1.58
MT-ND1P03886 AC138965.3-201ENST00000623875 498 ntBASIC5.21□□□□□ -1.58
MT-ND1P03886 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.21□□□□□ -1.58
MT-ND1P03886 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC5.21□□□□□ -1.58
MT-ND1P03886 AP001052.1-201ENST00000626421 99 ntBASIC5.21□□□□□ -1.58
MT-ND1P03886 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
MT-ND1P03886 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.21□□□□□ -1.58
MT-ND1P03886 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.21□□□□□ -1.58
MT-ND1P03886 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
MT-ND1P03886 AC090181.3-201ENST00000624777 1514 ntBASIC5.21□□□□□ -1.58
MT-ND1P03886 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
MT-ND1P03886 AC092376.2-201ENST00000622621 4116 ntBASIC5.21□□□□□ -1.58
MT-ND1P03886 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
MT-ND1P03886 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.21□□□□□ -1.58
MT-ND1P03886 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
MT-ND1P03886 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
MT-ND1P03886 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
MT-ND1P03886 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.2□□□□□ -1.58
MT-ND1P03886 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
MT-ND1P03886 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
MT-ND1P03886 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
MT-ND1P03886 COX6B1P3-201ENST00000312310 260 ntBASIC5.2□□□□□ -1.58
MT-ND1P03886 RN7SKP171-201ENST00000364417 303 ntBASIC5.2□□□□□ -1.58
MT-ND1P03886 MIR137-201ENST00000385223 102 ntBASIC5.2□□□□□ -1.58
MT-ND1P03886 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.2□□□□□ -1.58
MT-ND1P03886 IGBP1P3-201ENST00000447449 1000 ntBASIC5.2□□□□□ -1.58
MT-ND1P03886 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.2□□□□□ -1.58
MT-ND1P03886 AC083899.1-201ENST00000454465 3819 ntBASIC5.2□□□□□ -1.58
MT-ND1P03886 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.2□□□□□ -1.58
MT-ND1P03886 AZGP1P2-201ENST00000454506 345 ntBASIC5.2□□□□□ -1.58
MT-ND1P03886 MTCYBP14-201ENST00000457471 715 ntBASIC5.2□□□□□ -1.58
MT-ND1P03886 CST12P-201ENST00000457644 362 ntBASIC5.2□□□□□ -1.58
MT-ND1P03886 AC068228.1-201ENST00000461723 211 ntBASIC5.2□□□□□ -1.58
MT-ND1P03886 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.2□□□□□ -1.58
MT-ND1P03886 AC073610.1-201ENST00000489971 396 ntBASIC5.2□□□□□ -1.58
MT-ND1P03886 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
MT-ND1P03886 DUTP7-201ENST00000507982 486 ntBASIC5.2□□□□□ -1.58
MT-ND1P03886 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms