Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AC091305.2-201ENST00000624049 1576 ntBASIC5.33□□□□□ -1.56
CLDN9O95484 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.33□□□□□ -1.56
CLDN9O95484 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.33□□□□□ -1.56
CLDN9O95484 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.33□□□□□ -1.56
CLDN9O95484 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN9O95484 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN9O95484 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN9O95484 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN9O95484 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.33□□□□□ -1.56
CLDN9O95484 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN9O95484 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.33□□□□□ -1.56
CLDN9O95484 RNU6-167P-201ENST00000384292 106 ntBASIC5.33□□□□□ -1.56
CLDN9O95484 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CLDN9O95484 GAPDHP42-201ENST00000406848 981 ntBASIC5.33□□□□□ -1.56
CLDN9O95484 GPS2P1-201ENST00000411761 986 ntBASIC5.33□□□□□ -1.56
CLDN9O95484 HMGN1P20-201ENST00000411849 300 ntBASIC5.33□□□□□ -1.56
CLDN9O95484 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN9O95484 REREP1Y-201ENST00000422655 198 ntBASIC5.33□□□□□ -1.56
CLDN9O95484 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.33□□□□□ -1.56
CLDN9O95484 AL389925.1-201ENST00000432257 728 ntBASIC5.33□□□□□ -1.56
CLDN9O95484 REREP2Y-201ENST00000439103 200 ntBASIC5.33□□□□□ -1.56
CLDN9O95484 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN9O95484 AC144530.1-201ENST00000452862 555 ntBASIC5.33□□□□□ -1.56
CLDN9O95484 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN9O95484 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN9O95484 OR2A3P-201ENST00000493774 953 ntBASIC5.33□□□□□ -1.56
CLDN9O95484 RPSAP51-201ENST00000497462 645 ntBASIC5.33□□□□□ -1.56
CLDN9O95484 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.33□□□□□ -1.56
CLDN9O95484 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN9O95484 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN9O95484 NANOGNBP2-201ENST00000544753 553 ntBASIC5.33□□□□□ -1.56
CLDN9O95484 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CLDN9O95484 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.33□□□□□ -1.56
CLDN9O95484 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN9O95484 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN9O95484 AP005431.1-201ENST00000618479 319 ntBASIC5.33□□□□□ -1.56
CLDN9O95484 MIR193BHG-214ENST00000641765 509 ntBASIC5.33□□□□□ -1.56
CLDN9O95484 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.33□□□□□ -1.56
CLDN9O95484 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
CLDN9O95484 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CLDN9O95484 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CLDN9O95484 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.33□□□□□ -1.56
CLDN9O95484 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CLDN9O95484 AC109446.4-201ENST00000623235 2755 ntBASIC5.33□□□□□ -1.56
CLDN9O95484 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CLDN9O95484 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CLDN9O95484 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CLDN9O95484 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.32□□□□□ -1.56
CLDN9O95484 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN9O95484 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CLDN9O95484 AC114786.1-201ENST00000512892 1415 ntBASIC5.32□□□□□ -1.56
CLDN9O95484 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN9O95484 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.32□□□□□ -1.56
CLDN9O95484 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN9O95484 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CLDN9O95484 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CLDN9O95484 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN9O95484 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN9O95484 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN9O95484 RN7SKP6-201ENST00000364795 319 ntBASIC5.32□□□□□ -1.56
CLDN9O95484 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.32□□□□□ -1.56
CLDN9O95484 PPIAP9-201ENST00000403866 498 ntBASIC5.32□□□□□ -1.56
CLDN9O95484 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.32□□□□□ -1.56
CLDN9O95484 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.32□□□□□ -1.56
CLDN9O95484 CBX1P3-201ENST00000413296 527 ntBASIC5.32□□□□□ -1.56
CLDN9O95484 SLC20A1P1-201ENST00000413906 956 ntBASIC5.32□□□□□ -1.56
CLDN9O95484 EEF1B2P8-201ENST00000414101 671 ntBASIC5.32□□□□□ -1.56
CLDN9O95484 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.32□□□□□ -1.56
CLDN9O95484 AC079807.1-201ENST00000429993 481 ntBASIC5.32□□□□□ -1.56
CLDN9O95484 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.32□□□□□ -1.56
CLDN9O95484 AC002456.2-201ENST00000509356 380 ntBASIC5.32□□□□□ -1.56
CLDN9O95484 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.32□□□□□ -1.56
CLDN9O95484 CYCSP22-201ENST00000517555 339 ntBASIC5.32□□□□□ -1.56
CLDN9O95484 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.32□□□□□ -1.56
CLDN9O95484 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.32□□□□□ -1.56
CLDN9O95484 AC016839.1-201ENST00000578162 867 ntBASIC5.32□□□□□ -1.56
CLDN9O95484 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.32□□□□□ -1.56
CLDN9O95484 AC119501.1-201ENST00000603646 475 ntBASIC5.32□□□□□ -1.56
CLDN9O95484 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.32□□□□□ -1.56
CLDN9O95484 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.32□□□□□ -1.56
CLDN9O95484 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.32□□□□□ -1.56
CLDN9O95484 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.32□□□□□ -1.56
CLDN9O95484 AC073869.8-201ENST00000641806 335 ntBASIC5.32□□□□□ -1.56
CLDN9O95484 AC008691.1-209ENST00000642094 814 ntBASIC5.32□□□□□ -1.56
CLDN9O95484 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.32□□□□□ -1.56
CLDN9O95484 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
CLDN9O95484 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CLDN9O95484 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN9O95484 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.32□□□□□ -1.56
CLDN9O95484 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN9O95484 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CLDN9O95484 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.31□□□□□ -1.56
CLDN9O95484 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN9O95484 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN9O95484 YES1P1-201ENST00000418510 1628 ntBASIC5.31□□□□□ -1.56
CLDN9O95484 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN9O95484 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.31□□□□□ -1.56
CLDN9O95484 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN9O95484 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN9O95484 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms