Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
CHD2O14647 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CHD2O14647 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CHD2O14647 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CHD2O14647 OR5M12P-201ENST00000423388 929 ntBASIC7.44□□□□□ -1.22
CHD2O14647 RPL5P25-201ENST00000441148 775 ntBASIC7.44□□□□□ -1.22
CHD2O14647 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC7.44□□□□□ -1.22
CHD2O14647 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC7.44□□□□□ -1.22
CHD2O14647 CYCSP42-201ENST00000450823 238 ntBASIC7.44□□□□□ -1.22
CHD2O14647 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
CHD2O14647 AC008033.2-201ENST00000542626 177 ntBASIC7.44□□□□□ -1.22
CHD2O14647 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC7.44□□□□□ -1.22
CHD2O14647 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC7.44□□□□□ -1.22
CHD2O14647 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC7.44□□□□□ -1.22
CHD2O14647 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CHD2O14647 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC7.44□□□□□ -1.22
CHD2O14647 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CHD2O14647 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC7.44□□□□□ -1.22
CHD2O14647 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC7.44□□□□□ -1.22
CHD2O14647 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
CHD2O14647 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CHD2O14647 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CHD2O14647 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
CHD2O14647 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CHD2O14647 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
CHD2O14647 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CHD2O14647 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CHD2O14647 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC7.44□□□□□ -1.22
CHD2O14647 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC7.44□□□□□ -1.22
CHD2O14647 SDAD1P1-202ENST00000524156 2051 ntBASIC7.44□□□□□ -1.22
CHD2O14647 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
CHD2O14647 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC7.43□□□□□ -1.22
CHD2O14647 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
CHD2O14647 AP002530.1-201ENST00000405705 684 ntBASIC7.43□□□□□ -1.22
CHD2O14647 AC119751.6-201ENST00000416712 186 ntBASIC7.43□□□□□ -1.22
CHD2O14647 AC092570.3-201ENST00000420113 693 ntBASIC7.43□□□□□ -1.22
CHD2O14647 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC7.43□□□□□ -1.22
CHD2O14647 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC7.43□□□□□ -1.22
CHD2O14647 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
CHD2O14647 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
CHD2O14647 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC7.43□□□□□ -1.22
CHD2O14647 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CHD2O14647 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC7.43□□□□□ -1.22
CHD2O14647 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC7.43□□□□□ -1.22
CHD2O14647 AL162431.4-201ENST00000604674 411 ntBASIC7.43□□□□□ -1.22
CHD2O14647 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
CHD2O14647 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CHD2O14647 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
CHD2O14647 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CHD2O14647 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
CHD2O14647 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
CHD2O14647 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC7.43□□□□□ -1.22
CHD2O14647 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CHD2O14647 SNORA62-201ENST00000365493 153 ntBASIC7.43□□□□□ -1.22
CHD2O14647 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CHD2O14647 RNU1-136P-201ENST00000384181 164 ntBASIC7.43□□□□□ -1.22
CHD2O14647 AL049693.1-201ENST00000402760 611 ntBASIC7.43□□□□□ -1.22
CHD2O14647 AC096921.1-201ENST00000411661 375 ntBASIC7.43□□□□□ -1.22
CHD2O14647 GJA6P-201ENST00000415117 1042 ntBASIC7.43□□□□□ -1.22
CHD2O14647 RNF10P1-201ENST00000418589 369 ntBASIC7.43□□□□□ -1.22
CHD2O14647 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC7.43□□□□□ -1.22
CHD2O14647 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC7.43□□□□□ -1.22
CHD2O14647 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CHD2O14647 GAPDHP56-201ENST00000506031 988 ntBASIC7.43□□□□□ -1.22
CHD2O14647 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
CHD2O14647 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC7.43□□□□□ -1.22
CHD2O14647 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC7.43□□□□□ -1.22
CHD2O14647 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC7.43□□□□□ -1.22
CHD2O14647 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.43□□□□□ -1.22
CHD2O14647 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CHD2O14647 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
CHD2O14647 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
CHD2O14647 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CHD2O14647 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CHD2O14647 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CHD2O14647 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
CHD2O14647 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CHD2O14647 OR4F13P-202ENST00000560066 2054 ntBASIC7.42□□□□□ -1.22
CHD2O14647 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.42□□□□□ -1.22
CHD2O14647 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC7.42□□□□□ -1.22
CHD2O14647 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
CHD2O14647 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CHD2O14647 GLULP6-201ENST00000399502 913 ntBASIC7.42□□□□□ -1.22
CHD2O14647 RPS16P5-201ENST00000406501 404 ntBASIC7.42□□□□□ -1.22
CHD2O14647 RN7SKP100-201ENST00000411258 284 ntBASIC7.42□□□□□ -1.22
CHD2O14647 RNGTTP1-201ENST00000420965 728 ntBASIC7.42□□□□□ -1.22
CHD2O14647 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC7.42□□□□□ -1.22
CHD2O14647 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC7.42□□□□□ -1.22
CHD2O14647 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC7.42□□□□□ -1.22
CHD2O14647 SLC25A51P1-201ENST00000468432 871 ntBASIC7.42□□□□□ -1.22
CHD2O14647 AP000797.2-201ENST00000475768 606 ntBASIC7.42□□□□□ -1.22
CHD2O14647 AC026979.1-201ENST00000492525 396 ntBASIC7.42□□□□□ -1.22
CHD2O14647 COX6B1P5-201ENST00000509843 249 ntBASIC7.42□□□□□ -1.22
CHD2O14647 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC7.42□□□□□ -1.22
CHD2O14647 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CHD2O14647 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC7.42□□□□□ -1.22
CHD2O14647 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC7.42□□□□□ -1.22
CHD2O14647 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC7.42□□□□□ -1.22
CHD2O14647 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
CHD2O14647 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms