Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.97□□□□□ -1.45
O00370 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.97□□□□□ -1.45
O00370 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.97□□□□□ -1.45
O00370 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.97□□□□□ -1.45
O00370 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.97□□□□□ -1.45
O00370 AL353729.2-201ENST00000605859 1249 ntBASIC5.97□□□□□ -1.45
O00370 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.97□□□□□ -1.45
O00370 OR8G7P-201ENST00000616658 848 ntBASIC5.97□□□□□ -1.45
O00370 AC127024.6-201ENST00000621598 424 ntBASIC5.97□□□□□ -1.45
O00370 AC002044.3-201ENST00000623314 541 ntBASIC5.97□□□□□ -1.45
O00370 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
O00370 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.97□□□□□ -1.45
O00370 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
O00370 HSPD1P7-201ENST00000447985 1686 ntBASIC5.97□□□□□ -1.45
O00370 LINC02019-201ENST00000608605 2060 ntBASIC5.97□□□□□ -1.45
O00370 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.97□□□□□ -1.45
O00370 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.97□□□□□ -1.45
O00370 DDX18P6-201ENST00000450119 1997 ntBASIC5.97□□□□□ -1.45
O00370 AP005435.3-201ENST00000531260 3198 ntBASIC5.96□□□□□ -1.45
O00370 AC018809.2-201ENST00000602436 3823 ntBASIC5.96□□□□□ -1.45
O00370 YES1P1-201ENST00000418510 1628 ntBASIC5.96□□□□□ -1.45
O00370 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.96□□□□□ -1.45
O00370 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
O00370 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.45
O00370 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
O00370 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.96□□□□□ -1.46
O00370 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
O00370 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
O00370 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
O00370 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
O00370 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
O00370 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.96□□□□□ -1.46
O00370 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
O00370 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
O00370 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.96□□□□□ -1.46
O00370 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
O00370 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.96□□□□□ -1.46
O00370 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.96□□□□□ -1.46
O00370 AC104843.2-201ENST00000427666 297 ntBASIC5.96□□□□□ -1.46
O00370 TMEM183AP1-205ENST00000432739 290 ntBASIC5.96□□□□□ -1.46
O00370 TPTE2P1-204ENST00000435256 593 ntBASIC5.96□□□□□ -1.46
O00370 NANOGP9-201ENST00000439890 892 ntBASIC5.96□□□□□ -1.46
O00370 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.96□□□□□ -1.46
O00370 EEF1B2P6-201ENST00000445713 673 ntBASIC5.96□□□□□ -1.46
O00370 AL596266.1-201ENST00000448132 400 ntBASIC5.96□□□□□ -1.46
O00370 RPL31P15-201ENST00000449770 338 ntBASIC5.96□□□□□ -1.46
O00370 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
O00370 PPIAP19-201ENST00000486414 492 ntBASIC5.96□□□□□ -1.46
O00370 RPSAP51-201ENST00000497462 645 ntBASIC5.96□□□□□ -1.46
O00370 RPS17P5-201ENST00000498293 408 ntBASIC5.96□□□□□ -1.46
O00370 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.96□□□□□ -1.46
O00370 TRAV11-201ENST00000539512 339 ntBASIC5.96□□□□□ -1.46
O00370 MTND2P17-201ENST00000550281 688 ntBASIC5.96□□□□□ -1.46
O00370 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.96□□□□□ -1.46
O00370 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.96□□□□□ -1.46
O00370 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.96□□□□□ -1.46
O00370 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.96□□□□□ -1.46
O00370 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.96□□□□□ -1.46
O00370 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.96□□□□□ -1.46
O00370 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.96□□□□□ -1.46
O00370 RNA5SP440-201ENST00000612665 119 ntBASIC5.96□□□□□ -1.46
O00370 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.96□□□□□ -1.46
O00370 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.96□□□□□ -1.46
O00370 AC103703.1-201ENST00000634783 663 ntBASIC5.96□□□□□ -1.46
O00370 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.96□□□□□ -1.46
O00370 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
O00370 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
O00370 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
O00370 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
O00370 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
O00370 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.96□□□□□ -1.46
O00370 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
O00370 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
O00370 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.95□□□□□ -1.46
O00370 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
O00370 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
O00370 AC006206.1-201ENST00000544842 3387 ntBASIC5.95□□□□□ -1.46
O00370 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.95□□□□□ -1.46
O00370 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
O00370 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
O00370 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
O00370 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
O00370 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
O00370 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
O00370 AL121886.1-201ENST00000358609 435 ntBASIC5.95□□□□□ -1.46
O00370 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
O00370 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.95□□□□□ -1.46
O00370 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
O00370 AL589994.1-201ENST00000404962 340 ntBASIC5.95□□□□□ -1.46
O00370 AL445213.1-201ENST00000412589 747 ntBASIC5.95□□□□□ -1.46
O00370 AL356968.2-201ENST00000412769 1257 ntBASIC5.95□□□□□ -1.46
O00370 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.95□□□□□ -1.46
O00370 OR10T1P-201ENST00000424327 947 ntBASIC5.95□□□□□ -1.46
O00370 HMGN2P27-201ENST00000427352 270 ntBASIC5.95□□□□□ -1.46
O00370 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.95□□□□□ -1.46
O00370 AC002504.1-201ENST00000438281 691 ntBASIC5.95□□□□□ -1.46
O00370 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.95□□□□□ -1.46
O00370 AP000281.1-201ENST00000444036 316 ntBASIC5.95□□□□□ -1.46
O00370 AL161636.2-201ENST00000445179 927 ntBASIC5.95□□□□□ -1.46
O00370 AP000547.1-201ENST00000454360 617 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms