Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 OR56A4-201ENST00000330728 1209 ntBASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 RNU1-65P-201ENST00000363919 148 ntBASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 MIR551A-201ENST00000385042 96 ntBASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 DBIP1-201ENST00000401435 260 ntBASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 HMGB1P20-201ENST00000402555 677 ntBASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 RPL21P67-201ENST00000402896 478 ntBASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 AC090018.1-201ENST00000434369 367 ntBASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 TCEA1P3-201ENST00000443005 880 ntBASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 ACA64.1-201ENST00000459171 127 ntBASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 AC093827.1-201ENST00000480094 861 ntBASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 RPL37P23-201ENST00000492641 294 ntBASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 RPL15P21-201ENST00000495592 567 ntBASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 ENPP7P11-201ENST00000505915 627 ntBASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 AC006512.2-201ENST00000543250 486 ntBASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 AC092121.1-201ENST00000569452 202 ntBASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 FAM72A-208ENST00000607379 1139 ntBASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.4□□□□□ -1.54
TRIM49D1C9J1S8 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM49D1C9J1S8 AC139426.3-201ENST00000605648 2059 ntBASIC5.4□□□□□ -1.54
TRIM49D1C9J1S8 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM49D1C9J1S8 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
TRIM49D1C9J1S8 OR9G4-201ENST00000302957 984 ntBASIC5.4□□□□□ -1.54
TRIM49D1C9J1S8 RNU1-19P-201ENST00000363306 165 ntBASIC5.4□□□□□ -1.54
TRIM49D1C9J1S8 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM49D1C9J1S8 SNORA11.5-201ENST00000408163 128 ntBASIC5.4□□□□□ -1.54
TRIM49D1C9J1S8 AC245060.4-201ENST00000413293 1121 ntBASIC5.4□□□□□ -1.54
TRIM49D1C9J1S8 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM49D1C9J1S8 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM49D1C9J1S8 AC113412.1-201ENST00000425840 504 ntBASIC5.4□□□□□ -1.54
TRIM49D1C9J1S8 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM49D1C9J1S8 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM49D1C9J1S8 AC021660.1-201ENST00000465006 554 ntBASIC5.4□□□□□ -1.54
TRIM49D1C9J1S8 RPL12P24-201ENST00000474907 486 ntBASIC5.4□□□□□ -1.54
TRIM49D1C9J1S8 AC117394.1-201ENST00000477323 567 ntBASIC5.4□□□□□ -1.54
TRIM49D1C9J1S8 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM49D1C9J1S8 RNU6-615P-201ENST00000516065 106 ntBASIC5.4□□□□□ -1.54
TRIM49D1C9J1S8 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM49D1C9J1S8 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM49D1C9J1S8 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM49D1C9J1S8 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM49D1C9J1S8 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM49D1C9J1S8 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM49D1C9J1S8 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.4□□□□□ -1.54
TRIM49D1C9J1S8 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM49D1C9J1S8 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM49D1C9J1S8 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
TRIM49D1C9J1S8 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
TRIM49D1C9J1S8 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
TRIM49D1C9J1S8 AC022417.1-201ENST00000624768 1303 ntBASIC5.4□□□□□ -1.55
TRIM49D1C9J1S8 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.4□□□□□ -1.55
TRIM49D1C9J1S8 AC006600.2-201ENST00000624834 2506 ntBASIC5.4□□□□□ -1.55
TRIM49D1C9J1S8 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
TRIM49D1C9J1S8 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.4□□□□□ -1.55
TRIM49D1C9J1S8 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.4□□□□□ -1.55
TRIM49D1C9J1S8 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
TRIM49D1C9J1S8 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.4□□□□□ -1.55
TRIM49D1C9J1S8 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TRIM49D1C9J1S8 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TRIM49D1C9J1S8 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
TRIM49D1C9J1S8 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 RNA5SP394-201ENST00000364216 119 ntBASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 RN7SKP6-201ENST00000364795 319 ntBASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 AC004386.1-201ENST00000393214 761 ntBASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 CXADRP1-201ENST00000398098 1095 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms