Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 YRDCP3-201ENST00000456507 480 ntBASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 AL122020.1-201ENST00000472287 459 ntBASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 RPSAP51-201ENST00000497462 645 ntBASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 Y_RNA.667-201ENST00000516212 107 ntBASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 ABI1P1-201ENST00000603375 1120 ntBASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 AC017076.1-201ENST00000607613 578 ntBASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 RNA5SP439-201ENST00000617595 124 ntBASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 GTF2IP4-201ENST00000453092 2054 ntBASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 AC016745.2-201ENST00000608834 3443 ntBASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 PWAR1-201ENST00000624188 2414 ntBASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 SNORA63.3-201ENST00000362682 132 ntBASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 AL133482.1-201ENST00000415988 498 ntBASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 NENFP1-201ENST00000419476 466 ntBASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 RPL5P2-201ENST00000429598 854 ntBASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 NPM1P18-201ENST00000434232 732 ntBASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 MRPS21P3-201ENST00000436696 262 ntBASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 PCBP2P1-201ENST00000437262 977 ntBASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 RNF2P1-201ENST00000442955 1010 ntBASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 SNORD125-201ENST00000459538 96 ntBASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 AC068228.1-201ENST00000461723 211 ntBASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 RPL23AP73-201ENST00000492507 471 ntBASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 AL117692.1-201ENST00000494283 713 ntBASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 HMGB1P47-201ENST00000511281 589 ntBASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 OR5H7P-201ENST00000514084 930 ntBASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 AC097486.1-201ENST00000515331 210 ntBASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 RNU6-1102P-201ENST00000516149 96 ntBASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 SNORA76.2-201ENST00000517095 137 ntBASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 AC021678.3-201ENST00000517893 476 ntBASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 AP003396.4-201ENST00000527574 265 ntBASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 HMGN2P36-201ENST00000529541 409 ntBASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 AC093510.2-201ENST00000562820 896 ntBASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 AC027216.1-201ENST00000577726 685 ntBASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 ZNF92P2-201ENST00000600543 1059 ntBASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 CR589904.2-201ENST00000612533 440 ntBASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 AC007786.3-201ENST00000615154 596 ntBASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 AC025016.1-201ENST00000616746 682 ntBASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 MIR6806-201ENST00000622141 64 ntBASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 AP000943.4-201ENST00000622912 357 ntBASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 394.9 ms