Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 AP000797.2-201ENST00000475768 606 ntBASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 RPS4XP17-201ENST00000479057 754 ntBASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 RPL21P6-201ENST00000479171 504 ntBASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 AGGF1P3-201ENST00000493675 1213 ntBASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 AC114324.2-202ENST00000503812 134 ntBASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 AC073648.3-201ENST00000504939 925 ntBASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 AC134698.1-201ENST00000511619 643 ntBASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 CCNHP1-201ENST00000513311 678 ntBASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 AP002981.1-201ENST00000517692 975 ntBASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 NPM1P52-201ENST00000518264 846 ntBASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 AC036111.2-201ENST00000533247 901 ntBASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 AC027796.1-201ENST00000575593 512 ntBASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 MIR4260-201ENST00000583107 67 ntBASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 AL021918.2-201ENST00000613415 194 ntBASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 LINC00682-204ENST00000637677 931 ntTSL 5 BASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 SAMMSON-227ENST00000642114 1199 ntBASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 RN7SKP292-201ENST00000365522 317 ntBASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 BMS1P3-201ENST00000372011 932 ntBASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 RNA5SP241-201ENST00000391326 114 ntBASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 PCNPP4-201ENST00000414817 517 ntBASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 AC128677.1-201ENST00000436016 442 ntBASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 AL450263.2-201ENST00000439400 589 ntBASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 NANOGP9-201ENST00000439890 892 ntBASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 ARAFP2-201ENST00000440565 559 ntBASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 TFP1-201ENST00000460564 572 ntTSL 4 BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 TFP1-203ENST00000490470 561 ntTSL 4 BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 AP002453.1-201ENST00000492327 668 ntBASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 DUTP1-201ENST00000493631 470 ntBASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 ENPP7P11-201ENST00000505915 627 ntBASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 AC025857.1-201ENST00000525252 377 ntBASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 AC127024.5-201ENST00000580085 462 ntBASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 H3F3BP2-201ENST00000583907 357 ntBASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 MIR212-201ENST00000586026 110 ntBASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 AC090607.5-201ENST00000615692 224 ntBASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 AC025262.3-201ENST00000623666 360 ntBASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 FRG1EP-201ENST00000634469 770 ntBASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KCNIP3Q9Y2W7 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
KCNIP3Q9Y2W7 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
KCNIP3Q9Y2W7 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
KCNIP3Q9Y2W7 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
KCNIP3Q9Y2W7 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
KCNIP3Q9Y2W7 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
KCNIP3Q9Y2W7 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.68□□□□□ -1.66
KCNIP3Q9Y2W7 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
KCNIP3Q9Y2W7 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
KCNIP3Q9Y2W7 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 225.8 ms