Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 RN7SL481P-201ENST00000477764 299 ntBASIC8.07□□□□□ -1.12
SHANK2Q9UPX8 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC8.07□□□□□ -1.12
SHANK2Q9UPX8 AP002373.2-201ENST00000541631 1060 ntBASIC8.07□□□□□ -1.12
SHANK2Q9UPX8 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC8.07□□□□□ -1.12
SHANK2Q9UPX8 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
SHANK2Q9UPX8 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC8.07□□□□□ -1.12
SHANK2Q9UPX8 AC069542.2-201ENST00000624816 216 ntBASIC8.07□□□□□ -1.12
SHANK2Q9UPX8 AL353662.3-201ENST00000625131 237 ntBASIC8.07□□□□□ -1.12
SHANK2Q9UPX8 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
SHANK2Q9UPX8 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC8.07□□□□□ -1.12
SHANK2Q9UPX8 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SHANK2Q9UPX8 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SHANK2Q9UPX8 OR9K1P-202ENST00000641111 3217 ntBASIC8.07□□□□□ -1.12
SHANK2Q9UPX8 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
SHANK2Q9UPX8 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
SHANK2Q9UPX8 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC8.07□□□□□ -1.12
SHANK2Q9UPX8 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC8.07□□□□□ -1.12
SHANK2Q9UPX8 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SHANK2Q9UPX8 GNAS-202ENST00000306090 477 ntTSL 5 BASIC8.06□□□□□ -1.12
SHANK2Q9UPX8 DNAJA1P3-201ENST00000399417 1194 ntBASIC8.06□□□□□ -1.12
SHANK2Q9UPX8 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SHANK2Q9UPX8 AC016712.1-201ENST00000431088 378 ntBASIC8.06□□□□□ -1.12
SHANK2Q9UPX8 RN7SL423P-201ENST00000486202 304 ntBASIC8.06□□□□□ -1.12
SHANK2Q9UPX8 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC8.06□□□□□ -1.12
SHANK2Q9UPX8 AC092490.3-201ENST00000545370 572 ntBASIC8.06□□□□□ -1.12
SHANK2Q9UPX8 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC8.06□□□□□ -1.12
SHANK2Q9UPX8 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC8.06□□□□□ -1.12
SHANK2Q9UPX8 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC8.06□□□□□ -1.12
SHANK2Q9UPX8 AC083809.1-201ENST00000615051 472 ntBASIC8.06□□□□□ -1.12
SHANK2Q9UPX8 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC8.06□□□□□ -1.12
SHANK2Q9UPX8 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
SHANK2Q9UPX8 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SHANK2Q9UPX8 AC010401.2-201ENST00000575137 4934 ntBASIC8.06□□□□□ -1.12
SHANK2Q9UPX8 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
SHANK2Q9UPX8 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SHANK2Q9UPX8 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC8.06□□□□□ -1.12
SHANK2Q9UPX8 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
SHANK2Q9UPX8 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
SHANK2Q9UPX8 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SHANK2Q9UPX8 U3.3-201ENST00000362986 216 ntBASIC8.06□□□□□ -1.12
SHANK2Q9UPX8 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC8.06□□□□□ -1.12
SHANK2Q9UPX8 USP9YP9-201ENST00000429406 715 ntBASIC8.06□□□□□ -1.12
SHANK2Q9UPX8 AL138878.2-201ENST00000440581 1241 ntBASIC8.06□□□□□ -1.12
SHANK2Q9UPX8 AC073648.4-201ENST00000442655 781 ntBASIC8.06□□□□□ -1.12
SHANK2Q9UPX8 AC008897.1-201ENST00000494006 347 ntBASIC8.06□□□□□ -1.12
SHANK2Q9UPX8 GAPDHP62-201ENST00000515313 990 ntBASIC8.06□□□□□ -1.12
SHANK2Q9UPX8 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC8.06□□□□□ -1.12
SHANK2Q9UPX8 AC134349.2-201ENST00000535136 910 ntBASIC8.06□□□□□ -1.12
SHANK2Q9UPX8 RNF138P2-201ENST00000603490 592 ntBASIC8.06□□□□□ -1.12
SHANK2Q9UPX8 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SHANK2Q9UPX8 AC087385.3-201ENST00000620477 187 ntBASIC8.06□□□□□ -1.12
SHANK2Q9UPX8 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC8.06□□□□□ -1.12
SHANK2Q9UPX8 AC074101.1-201ENST00000637861 241 ntBASIC8.06□□□□□ -1.12
SHANK2Q9UPX8 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC8.06□□□□□ -1.12
SHANK2Q9UPX8 AC009779.8-201ENST00000641684 4384 ntBASIC8.05□□□□□ -1.12
SHANK2Q9UPX8 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC8.05□□□□□ -1.12
SHANK2Q9UPX8 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SHANK2Q9UPX8 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
SHANK2Q9UPX8 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC8.05□□□□□ -1.12
SHANK2Q9UPX8 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
SHANK2Q9UPX8 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SHANK2Q9UPX8 ZNF969P-201ENST00000510345 2341 ntBASIC8.05□□□□□ -1.12
SHANK2Q9UPX8 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SHANK2Q9UPX8 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC8.05□□□□□ -1.12
SHANK2Q9UPX8 MIR23A-201ENST00000385245 73 ntBASIC8.05□□□□□ -1.12
SHANK2Q9UPX8 AC079168.1-201ENST00000458741 345 ntBASIC8.05□□□□□ -1.12
SHANK2Q9UPX8 RPL37AP8-201ENST00000494116 276 ntBASIC8.05□□□□□ -1.12
SHANK2Q9UPX8 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC8.05□□□□□ -1.12
SHANK2Q9UPX8 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SHANK2Q9UPX8 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC8.05□□□□□ -1.12
SHANK2Q9UPX8 AL627230.1-201ENST00000613077 211 ntBASIC8.05□□□□□ -1.12
SHANK2Q9UPX8 AL591926.8-201ENST00000616876 211 ntBASIC8.05□□□□□ -1.12
SHANK2Q9UPX8 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC8.05□□□□□ -1.12
SHANK2Q9UPX8 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC8.05□□□□□ -1.12
SHANK2Q9UPX8 AC068870.1-201ENST00000563737 2455 ntBASIC8.05□□□□□ -1.12
SHANK2Q9UPX8 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
SHANK2Q9UPX8 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SHANK2Q9UPX8 HSPA8P14-201ENST00000552265 1805 ntBASIC8.04□□□□□ -1.12
SHANK2Q9UPX8 ATP5A1P1-201ENST00000454088 1321 ntBASIC8.04□□□□□ -1.12
SHANK2Q9UPX8 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
SHANK2Q9UPX8 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SHANK2Q9UPX8 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SHANK2Q9UPX8 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SHANK2Q9UPX8 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC8.04□□□□□ -1.12
SHANK2Q9UPX8 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC8.04□□□□□ -1.12
SHANK2Q9UPX8 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC8.04□□□□□ -1.12
SHANK2Q9UPX8 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC8.04□□□□□ -1.12
SHANK2Q9UPX8 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SHANK2Q9UPX8 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SHANK2Q9UPX8 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SHANK2Q9UPX8 RN7SKP113-201ENST00000363891 295 ntBASIC8.04□□□□□ -1.12
SHANK2Q9UPX8 NUDT19P3-201ENST00000404698 555 ntBASIC8.04□□□□□ -1.12
SHANK2Q9UPX8 RPS4XP9-201ENST00000405151 780 ntBASIC8.04□□□□□ -1.12
SHANK2Q9UPX8 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC8.04□□□□□ -1.12
SHANK2Q9UPX8 AC091912.1-201ENST00000511351 248 ntBASIC8.04□□□□□ -1.12
SHANK2Q9UPX8 AC134698.5-201ENST00000519444 336 ntBASIC8.04□□□□□ -1.12
SHANK2Q9UPX8 C1GALT1P3-201ENST00000522049 819 ntBASIC8.04□□□□□ -1.12
SHANK2Q9UPX8 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC8.04□□□□□ -1.12
SHANK2Q9UPX8 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC8.04□□□□□ -1.12
SHANK2Q9UPX8 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC8.04□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms