Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.52□□□□□ -1.37
COL20A1Q9P218 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL20A1Q9P218 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL20A1Q9P218 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL20A1Q9P218 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL20A1Q9P218 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL20A1Q9P218 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL20A1Q9P218 RNA5SP30-201ENST00000365552 115 ntBASIC6.52□□□□□ -1.37
COL20A1Q9P218 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL20A1Q9P218 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
COL20A1Q9P218 AL355143.1-201ENST00000407101 841 ntBASIC6.52□□□□□ -1.37
COL20A1Q9P218 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.52□□□□□ -1.37
COL20A1Q9P218 TNPO1P1-201ENST00000423641 1138 ntBASIC6.52□□□□□ -1.37
COL20A1Q9P218 AC113412.1-201ENST00000425840 504 ntBASIC6.52□□□□□ -1.37
COL20A1Q9P218 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.52□□□□□ -1.37
COL20A1Q9P218 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.52□□□□□ -1.37
COL20A1Q9P218 MTND2P21-201ENST00000436242 1042 ntBASIC6.52□□□□□ -1.37
COL20A1Q9P218 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.52□□□□□ -1.37
COL20A1Q9P218 RNF2P1-201ENST00000442955 1010 ntBASIC6.52□□□□□ -1.37
COL20A1Q9P218 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.52□□□□□ -1.37
COL20A1Q9P218 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.52□□□□□ -1.37
COL20A1Q9P218 EIF2S2P5-201ENST00000457635 968 ntBASIC6.52□□□□□ -1.37
COL20A1Q9P218 AC110749.1-201ENST00000462007 357 ntBASIC6.52□□□□□ -1.37
COL20A1Q9P218 RPL35AP19-201ENST00000469425 329 ntBASIC6.52□□□□□ -1.37
COL20A1Q9P218 AC078857.1-201ENST00000469870 667 ntBASIC6.52□□□□□ -1.37
COL20A1Q9P218 AC105918.1-201ENST00000474399 838 ntBASIC6.52□□□□□ -1.37
COL20A1Q9P218 RN7SL184P-201ENST00000488308 297 ntBASIC6.52□□□□□ -1.37
COL20A1Q9P218 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.52□□□□□ -1.37
COL20A1Q9P218 AC138409.2-202ENST00000507274 458 ntBASIC6.52□□□□□ -1.37
COL20A1Q9P218 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.52□□□□□ -1.37
COL20A1Q9P218 IGKV2-19-201ENST00000518132 283 ntBASIC6.52□□□□□ -1.37
COL20A1Q9P218 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC6.52□□□□□ -1.37
COL20A1Q9P218 IGKV2-18-201ENST00000522607 343 ntBASIC6.52□□□□□ -1.37
COL20A1Q9P218 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
COL20A1Q9P218 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC6.52□□□□□ -1.37
COL20A1Q9P218 MTND5P21-201ENST00000531961 522 ntBASIC6.52□□□□□ -1.37
COL20A1Q9P218 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.52□□□□□ -1.37
COL20A1Q9P218 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.52□□□□□ -1.37
COL20A1Q9P218 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.52□□□□□ -1.37
COL20A1Q9P218 AC018558.5-201ENST00000565840 952 ntBASIC6.52□□□□□ -1.37
COL20A1Q9P218 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.52□□□□□ -1.37
COL20A1Q9P218 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.52□□□□□ -1.37
COL20A1Q9P218 AP003117.1-201ENST00000602771 554 ntBASIC6.52□□□□□ -1.37
COL20A1Q9P218 AP000864.1-201ENST00000609424 650 ntBASIC6.52□□□□□ -1.37
COL20A1Q9P218 MIR6826-201ENST00000617808 98 ntBASIC6.52□□□□□ -1.37
COL20A1Q9P218 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
COL20A1Q9P218 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
COL20A1Q9P218 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
COL20A1Q9P218 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.52□□□□□ -1.37
COL20A1Q9P218 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
COL20A1Q9P218 AC009501.3-201ENST00000605001 1352 ntBASIC6.52□□□□□ -1.37
COL20A1Q9P218 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
COL20A1Q9P218 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL20A1Q9P218 AC120036.2-201ENST00000509729 1474 ntBASIC6.52□□□□□ -1.37
COL20A1Q9P218 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL20A1Q9P218 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
COL20A1Q9P218 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.52□□□□□ -1.37
COL20A1Q9P218 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL20A1Q9P218 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL20A1Q9P218 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.52□□□□□ -1.37
COL20A1Q9P218 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL20A1Q9P218 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL20A1Q9P218 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
COL20A1Q9P218 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL20A1Q9P218 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL20A1Q9P218 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL20A1Q9P218 AL033543.1-201ENST00000623440 13454 ntBASIC6.51□□□□□ -1.37
COL20A1Q9P218 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.51□□□□□ -1.37
COL20A1Q9P218 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.51□□□□□ -1.37
COL20A1Q9P218 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.51□□□□□ -1.37
COL20A1Q9P218 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL20A1Q9P218 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL20A1Q9P218 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
COL20A1Q9P218 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL20A1Q9P218 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.51□□□□□ -1.37
COL20A1Q9P218 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.51□□□□□ -1.37
COL20A1Q9P218 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.51□□□□□ -1.37
COL20A1Q9P218 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL20A1Q9P218 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL20A1Q9P218 GCNT6-201ENST00000379591 934 ntBASIC6.51□□□□□ -1.37
COL20A1Q9P218 MIR620-201ENST00000385232 95 ntBASIC6.51□□□□□ -1.37
COL20A1Q9P218 MIR130A-201ENST00000385274 89 ntBASIC6.51□□□□□ -1.37
COL20A1Q9P218 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
COL20A1Q9P218 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.51□□□□□ -1.37
COL20A1Q9P218 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.51□□□□□ -1.37
COL20A1Q9P218 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC6.51□□□□□ -1.37
COL20A1Q9P218 AK3P5-201ENST00000432033 519 ntBASIC6.51□□□□□ -1.37
COL20A1Q9P218 AL365220.1-201ENST00000432923 399 ntBASIC6.51□□□□□ -1.37
COL20A1Q9P218 AL606490.7-201ENST00000433136 191 ntBASIC6.51□□□□□ -1.37
COL20A1Q9P218 AL513321.1-201ENST00000441175 761 ntBASIC6.51□□□□□ -1.37
COL20A1Q9P218 Z99127.2-201ENST00000441426 334 ntBASIC6.51□□□□□ -1.37
COL20A1Q9P218 NPM1P19-201ENST00000450070 712 ntBASIC6.51□□□□□ -1.37
COL20A1Q9P218 RANP1-206ENST00000455094 651 ntBASIC6.51□□□□□ -1.37
COL20A1Q9P218 MTND6P32-201ENST00000457611 483 ntBASIC6.51□□□□□ -1.37
COL20A1Q9P218 AC092902.1-201ENST00000486999 259 ntBASIC6.51□□□□□ -1.37
COL20A1Q9P218 RN7SL214P-201ENST00000487317 265 ntBASIC6.51□□□□□ -1.37
COL20A1Q9P218 TRBV5-2-201ENST00000489095 273 ntBASIC6.51□□□□□ -1.37
COL20A1Q9P218 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL20A1Q9P218 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.51□□□□□ -1.37
COL20A1Q9P218 VTA1P2-201ENST00000520205 911 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms