Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 RPS26P24-201ENST00000497656 331 ntBASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 MIR7853-201ENST00000584820 132 ntBASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 FAM72A-208ENST00000607379 1139 ntBASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 AC007683.2-201ENST00000624681 714 ntBASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 BCORP1-203ENST00000513194 5093 ntBASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 AC092451.3-201ENST00000625067 1343 ntBASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 AC100757.1-201ENST00000616872 1835 ntBASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 CDY11P-201ENST00000447168 1651 ntBASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 RN7SKP286-201ENST00000410894 299 ntBASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 FMO7P-201ENST00000436045 768 ntBASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 AL391987.1-201ENST00000441025 200 ntBASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 AC019185.1-201ENST00000442718 389 ntBASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 EEF1B2P6-201ENST00000445713 673 ntBASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 RN7SL72P-201ENST00000460697 269 ntBASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 AC104109.1-201ENST00000498563 436 ntBASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 AL049872.1-201ENST00000556323 322 ntBASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 AC012616.1-201ENST00000600294 197 ntBASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 AC010632.3-201ENST00000611377 369 ntBASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 AC008115.3-201ENST00000614874 549 ntBASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 AL162574.1-201ENST00000615702 950 ntBASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 MIR4302-201ENST00000638058 60 ntBASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 AC073869.8-201ENST00000641806 335 ntBASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCSER1Q9C0I3 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCSER1Q9C0I3 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.18□□□□□ -1.42
CCSER1Q9C0I3 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCSER1Q9C0I3 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCSER1Q9C0I3 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.18□□□□□ -1.42
CCSER1Q9C0I3 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCSER1Q9C0I3 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.18□□□□□ -1.42
CCSER1Q9C0I3 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.18□□□□□ -1.42
CCSER1Q9C0I3 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
CCSER1Q9C0I3 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCSER1Q9C0I3 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.18□□□□□ -1.42
CCSER1Q9C0I3 RN7SKP186-201ENST00000365371 303 ntBASIC6.18□□□□□ -1.42
CCSER1Q9C0I3 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCSER1Q9C0I3 PPIAP9-201ENST00000403866 498 ntBASIC6.18□□□□□ -1.42
CCSER1Q9C0I3 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.18□□□□□ -1.42
CCSER1Q9C0I3 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.18□□□□□ -1.42
CCSER1Q9C0I3 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.18□□□□□ -1.42
CCSER1Q9C0I3 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.18□□□□□ -1.42
CCSER1Q9C0I3 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CCSER1Q9C0I3 NPM1P5-201ENST00000557228 838 ntBASIC6.18□□□□□ -1.42
CCSER1Q9C0I3 AC011445.2-201ENST00000599274 173 ntBASIC6.18□□□□□ -1.42
CCSER1Q9C0I3 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.18□□□□□ -1.42
CCSER1Q9C0I3 MIR6862-1-201ENST00000613016 70 ntBASIC6.18□□□□□ -1.42
CCSER1Q9C0I3 MIR6862-2-201ENST00000614755 70 ntBASIC6.18□□□□□ -1.42
CCSER1Q9C0I3 uc_338.7-201ENST00000621834 124 ntBASIC6.18□□□□□ -1.42
CCSER1Q9C0I3 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CCSER1Q9C0I3 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.18□□□□□ -1.42
CCSER1Q9C0I3 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCSER1Q9C0I3 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms