Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 SAA3P-201ENST00000533267 365 ntBASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 AC010738.1-201ENST00000604970 987 ntBASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 AL355816.1-201ENST00000607951 118 ntBASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 AC063962.1-201ENST00000608199 521 ntBASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 AL137000.1-201ENST00000610528 1244 ntBASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 AC243654.2-201ENST00000612843 443 ntBASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 AL445670.1-201ENST00000618889 801 ntBASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 AC135068.11-201ENST00000636378 921 ntBASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 AC009313.2-201ENST00000417893 1941 ntBASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 AC020633.1-201ENST00000468439 2247 ntBASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 AC011416.1-201ENST00000514947 1732 ntBASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 AC012213.2-201ENST00000562917 4597 ntBASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 RN7SKP184-201ENST00000362348 333 ntBASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 RNU5D-1-201ENST00000363299 116 ntBASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 OR7E156P-201ENST00000400303 464 ntBASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 RPL23AP47-201ENST00000408017 460 ntBASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 RNU2-65P-201ENST00000410162 185 ntBASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 NME1P1-201ENST00000420914 382 ntBASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 FAM183DP-201ENST00000421987 399 ntBASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 AL672212.1-201ENST00000422246 400 ntBASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 VN1R108P-201ENST00000431580 830 ntBASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 AC092106.2-201ENST00000436597 487 ntBASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 LDHAP2-201ENST00000437325 985 ntBASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 ELOCP8-201ENST00000439309 332 ntBASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 ELOCP15-201ENST00000442090 332 ntBASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 PPIAP32-201ENST00000449940 472 ntBASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 RPL12P26-201ENST00000452430 487 ntBASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 RPL31P11-202ENST00000454082 372 ntBASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 AL445669.2-201ENST00000454425 421 ntBASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 AC092045.1-201ENST00000495716 1231 ntBASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 AC011352.3-201ENST00000505162 593 ntBASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 EIF3KP3-201ENST00000514461 639 ntBASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 AC027801.3-201ENST00000515049 698 ntBASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 MTCO1P30-201ENST00000515244 580 ntBASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 NAP1L1P1-201ENST00000524793 1063 ntBASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 AC026458.1-201ENST00000564330 438 ntBASIC7.7□□□□□ -1.18
TRAIPQ9BWF2 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms