Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 OSTCP1-201ENST00000455507 450 ntBASIC5.02□□□□□ -1.61
SSX3Q99909 BX276092.8-201ENST00000455722 250 ntBASIC5.02□□□□□ -1.61
SSX3Q99909 AL022319.1-201ENST00000458183 1167 ntBASIC5.02□□□□□ -1.61
SSX3Q99909 AC068228.1-201ENST00000461723 211 ntBASIC5.02□□□□□ -1.61
SSX3Q99909 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.02□□□□□ -1.61
SSX3Q99909 OR7E99P-201ENST00000505750 922 ntBASIC5.02□□□□□ -1.61
SSX3Q99909 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.02□□□□□ -1.61
SSX3Q99909 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.02□□□□□ -1.61
SSX3Q99909 RNU6-513P-201ENST00000516104 104 ntBASIC5.02□□□□□ -1.61
SSX3Q99909 Y_RNA.710-201ENST00000516975 110 ntBASIC5.02□□□□□ -1.61
SSX3Q99909 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.02□□□□□ -1.61
SSX3Q99909 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.02□□□□□ -1.61
SSX3Q99909 OR7E10P-201ENST00000526420 991 ntBASIC5.02□□□□□ -1.61
SSX3Q99909 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.02□□□□□ -1.61
SSX3Q99909 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.02□□□□□ -1.61
SSX3Q99909 AC087888.1-201ENST00000550884 1254 ntBASIC5.02□□□□□ -1.61
SSX3Q99909 AC090888.3-201ENST00000558917 509 ntBASIC5.02□□□□□ -1.61
SSX3Q99909 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.02□□□□□ -1.61
SSX3Q99909 SULT1C2P2-201ENST00000562517 294 ntBASIC5.02□□□□□ -1.61
SSX3Q99909 AC092332.1-201ENST00000563684 829 ntBASIC5.02□□□□□ -1.61
SSX3Q99909 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.02□□□□□ -1.61
SSX3Q99909 BX322635.1-201ENST00000605804 496 ntBASIC5.02□□□□□ -1.61
SSX3Q99909 AL353729.2-201ENST00000605859 1249 ntBASIC5.02□□□□□ -1.61
SSX3Q99909 AP001437.1-201ENST00000608783 456 ntBASIC5.02□□□□□ -1.61
SSX3Q99909 BNIP3P41-202ENST00000616656 861 ntBASIC5.02□□□□□ -1.61
SSX3Q99909 MIR6861-201ENST00000618657 64 ntBASIC5.02□□□□□ -1.61
SSX3Q99909 AC104820.1-201ENST00000624183 307 ntBASIC5.02□□□□□ -1.61
SSX3Q99909 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.02□□□□□ -1.61
SSX3Q99909 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.02□□□□□ -1.61
SSX3Q99909 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SSX3Q99909 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.02□□□□□ -1.61
SSX3Q99909 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SSX3Q99909 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SSX3Q99909 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SSX3Q99909 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.02□□□□□ -1.61
SSX3Q99909 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.02□□□□□ -1.61
SSX3Q99909 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.02□□□□□ -1.61
SSX3Q99909 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SSX3Q99909 AC003973.3-201ENST00000624863 2822 ntBASIC5.01□□□□□ -1.61
SSX3Q99909 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSX3Q99909 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.01□□□□□ -1.61
SSX3Q99909 AL133243.2-201ENST00000610331 1621 ntBASIC5.01□□□□□ -1.61
SSX3Q99909 EIF3EP1-201ENST00000433978 1316 ntBASIC5.01□□□□□ -1.61
SSX3Q99909 AC004817.4-201ENST00000602396 3625 ntBASIC5.01□□□□□ -1.61
SSX3Q99909 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.01□□□□□ -1.61
SSX3Q99909 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.01□□□□□ -1.61
SSX3Q99909 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SSX3Q99909 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.01□□□□□ -1.61
SSX3Q99909 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSX3Q99909 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSX3Q99909 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SSX3Q99909 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSX3Q99909 RN7SKP74-201ENST00000362849 309 ntBASIC5.01□□□□□ -1.61
SSX3Q99909 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.01□□□□□ -1.61
SSX3Q99909 MT-TP-201ENST00000387461 68 ntBASIC5.01□□□□□ -1.61
SSX3Q99909 AC004386.1-201ENST00000393214 761 ntBASIC5.01□□□□□ -1.61
SSX3Q99909 RNA5SP156-201ENST00000410250 110 ntBASIC5.01□□□□□ -1.61
SSX3Q99909 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.01□□□□□ -1.61
SSX3Q99909 RPS7P8-201ENST00000418311 581 ntBASIC5.01□□□□□ -1.61
SSX3Q99909 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SSX3Q99909 AC130360.1-201ENST00000425489 1117 ntBASIC5.01□□□□□ -1.61
SSX3Q99909 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SSX3Q99909 AL365220.1-201ENST00000432923 399 ntBASIC5.01□□□□□ -1.61
SSX3Q99909 PNKDP1-201ENST00000435914 430 ntBASIC5.01□□□□□ -1.61
SSX3Q99909 AL663074.2-201ENST00000440621 479 ntBASIC5.01□□□□□ -1.61
SSX3Q99909 RPS10P18-201ENST00000442662 495 ntBASIC5.01□□□□□ -1.61
SSX3Q99909 AL157884.3-201ENST00000448273 1184 ntBASIC5.01□□□□□ -1.61
SSX3Q99909 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.01□□□□□ -1.61
SSX3Q99909 PPIAP7-201ENST00000454070 489 ntBASIC5.01□□□□□ -1.61
SSX3Q99909 RN7SL188P-201ENST00000469842 285 ntBASIC5.01□□□□□ -1.61
SSX3Q99909 RBBP4P1-201ENST00000502424 1276 ntBASIC5.01□□□□□ -1.61
SSX3Q99909 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.01□□□□□ -1.61
SSX3Q99909 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.01□□□□□ -1.61
SSX3Q99909 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.01□□□□□ -1.61
SSX3Q99909 AC090958.1-201ENST00000511122 351 ntBASIC5.01□□□□□ -1.61
SSX3Q99909 snoU109.6-201ENST00000516831 118 ntBASIC5.01□□□□□ -1.61
SSX3Q99909 RN7SKP35-201ENST00000517210 151 ntBASIC5.01□□□□□ -1.61
SSX3Q99909 AC104997.1-201ENST00000519761 717 ntBASIC5.01□□□□□ -1.61
SSX3Q99909 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.01□□□□□ -1.61
SSX3Q99909 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.01□□□□□ -1.61
SSX3Q99909 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.01□□□□□ -1.61
SSX3Q99909 AC130365.2-201ENST00000525882 1201 ntBASIC5.01□□□□□ -1.61
SSX3Q99909 AP000620.1-201ENST00000527147 504 ntBASIC5.01□□□□□ -1.61
SSX3Q99909 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.01□□□□□ -1.61
SSX3Q99909 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.01□□□□□ -1.61
SSX3Q99909 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.01□□□□□ -1.61
SSX3Q99909 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
SSX3Q99909 SETP1-201ENST00000556014 845 ntBASIC5.01□□□□□ -1.61
SSX3Q99909 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.01□□□□□ -1.61
SSX3Q99909 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.01□□□□□ -1.61
SSX3Q99909 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.01□□□□□ -1.61
SSX3Q99909 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.01□□□□□ -1.61
SSX3Q99909 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.01□□□□□ -1.61
SSX3Q99909 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.01□□□□□ -1.61
SSX3Q99909 AC005229.3-201ENST00000603438 323 ntBASIC5.01□□□□□ -1.61
SSX3Q99909 AC073333.2-201ENST00000603589 769 ntBASIC5.01□□□□□ -1.61
SSX3Q99909 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.01□□□□□ -1.61
SSX3Q99909 AC022106.1-201ENST00000612834 766 ntBASIC5.01□□□□□ -1.61
SSX3Q99909 AC024255.1-201ENST00000614376 102 ntBASIC5.01□□□□□ -1.61
SSX3Q99909 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms