Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AL049870.4-201ENST00000555741 486 ntBASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 AC006530.1-201ENST00000555980 571 ntBASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 HMGN1P26-201ENST00000558737 303 ntBASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 PPIAP14-201ENST00000577627 496 ntBASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 AC125494.3-201ENST00000602759 455 ntBASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 AL136363.2-201ENST00000604173 851 ntBASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 AP001596.2-201ENST00000608410 312 ntBASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 AC106782.7-201ENST00000624024 418 ntBASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 AC133555.5-201ENST00000624430 418 ntBASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 AC003992.1-201ENST00000635364 557 ntBASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 AC117409.1-201ENST00000470499 1310 ntBASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 RAD17P2-201ENST00000451754 1977 ntBASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 AP000776.1-201ENST00000530032 1663 ntBASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 AC110597.1-201ENST00000562669 3176 ntBASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 OR56B2P-201ENST00000317102 954 ntBASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 RN7SKP191-201ENST00000364713 306 ntBASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 Y_RNA.517-201ENST00000384551 106 ntBASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 AL139421.1-201ENST00000423010 169 ntBASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 AHCYP8-201ENST00000425108 209 ntBASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 CENPIP1-201ENST00000425713 902 ntBASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 AL022331.1-201ENST00000429025 477 ntBASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 RPSAP32-201ENST00000432681 526 ntBASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 PPIAP32-201ENST00000449940 472 ntBASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 MTCYBP1-201ENST00000454315 1119 ntBASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 RN7SL382P-201ENST00000482631 282 ntBASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 RN7SL143P-201ENST00000496780 297 ntBASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 ARL4AP1-201ENST00000503220 705 ntBASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 AC095057.1-201ENST00000507583 168 ntBASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 LTV1P1-201ENST00000510683 1237 ntBASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 AC091965.2-201ENST00000512324 613 ntBASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 AC022447.1-201ENST00000515358 464 ntBASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 PRELID3BP4-201ENST00000515476 571 ntBASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 AP001542.2-201ENST00000593141 364 ntBASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms