Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 AC008937.2-201ENST00000415589 619 ntTSL 3 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 USP9YP27-201ENST00000418455 438 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 AC006457.1-201ENST00000420733 392 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 AL031733.1-201ENST00000422817 455 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 AL136231.1-201ENST00000429407 730 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 AC012506.4-202ENST00000430051 572 ntTSL 5 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 AL672138.1-201ENST00000450604 1015 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 AL590365.1-201ENST00000450788 243 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 RGS5-217ENST00000451759 835 ntTSL 3 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 AL591438.2-201ENST00000452635 691 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 AC123768.1-202ENST00000460684 461 ntTSL 3 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 AC004801.2-201ENST00000468202 779 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 RPL5P17-201ENST00000469685 877 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 AC087312.1-201ENST00000471411 480 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 RBM43P1-201ENST00000476891 1081 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 CREM-231ENST00000479070 939 ntTSL 5 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 RPL17P37-201ENST00000490729 548 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 RN7SL464P-201ENST00000492743 297 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 NENFP3-201ENST00000503735 313 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 NDUFA5P12-201ENST00000503796 343 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 GSTO3P-201ENST00000504733 718 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 LEF1-AS1-205ENST00000508286 444 ntTSL 2 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 AC010493.1-201ENST00000513479 292 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 COX6B1P6-201ENST00000522347 255 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 AP002991.1-201ENST00000539305 574 ntTSL 4 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 EGLN3P1-201ENST00000541727 720 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 AC069235.1-202ENST00000545535 540 ntTSL 3 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 AC026111.1-201ENST00000551090 1195 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 AC073657.1-202ENST00000562063 334 ntTSL 3 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 BCAP31P2-201ENST00000563143 399 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 BCAP31P1-201ENST00000565437 385 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 AC090287.1-201ENST00000578374 291 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 AC022884.3-201ENST00000579571 248 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 NRBF2P1-201ENST00000587407 859 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 AC103710.4-201ENST00000609301 899 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 AC048380.3-201ENST00000623145 796 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 AC068880.5-201ENST00000624331 290 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 AL158175.1-201ENST00000634327 1127 ntTSL 5 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 AL356289.1-201ENST00000635446 743 ntTSL 3 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 ATE1-AS1-202ENST00000636460 506 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 CASC19-284ENST00000642142 1868 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 AC034111.1-201ENST00000562143 3770 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 AC119744.1-201ENST00000454746 1715 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 AMZ2-210ENST00000580753 1339 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 SALL1P1-201ENST00000438101 3837 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 OR51A10P-201ENST00000307165 937 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 RIT2-201ENST00000326695 1092 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 GPN2-201ENST00000374133 715 ntTSL 3 BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 RNU6-1151P-201ENST00000384684 107 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 RNU6-780P-201ENST00000391030 104 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 VN1R8P-201ENST00000407739 893 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 AL451061.1-201ENST00000407887 862 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 PPIAP2-201ENST00000414143 492 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 C14orf2-202ENST00000414262 842 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 AL513174.1-201ENST00000423182 629 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 HSPD1P12-201ENST00000429127 1069 ntBASIC7.29□□□□□ -1.24
DEPDC4Q8N2C3 AC006450.2-201ENST00000429482 581 ntTSL 2 BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms