Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 AC011712.1-201ENST00000588959 234 ntBASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 AC010980.1-204ENST00000589724 585 ntTSL 5 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 ADGRF5P1-202ENST00000590130 980 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 AC243960.4-201ENST00000600532 288 ntBASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 AC079228.1-201ENST00000624774 1049 ntBASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 AL590396.3-201ENST00000636334 300 ntBASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 AL356585.10-201ENST00000641883 123 ntBASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 AC145138.1-201ENST00000512908 2851 ntBASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 AC016930.1-201ENST00000468766 2205 ntBASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 MAPK10-354ENST00000641823 2732 ntBASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 AC126773.4-201ENST00000612545 3043 ntBASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 AC069222.1-201ENST00000608028 3360 ntBASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 RN7SKP77-201ENST00000363261 353 ntBASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 RNA5SP114-201ENST00000363780 113 ntBASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 RN7SKP118-201ENST00000364331 330 ntBASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 snoZ40.1-201ENST00000364540 72 ntBASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 Y_RNA.452-201ENST00000384202 108 ntBASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 SNORA70.8-201ENST00000384231 136 ntBASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 SNORA19-201ENST00000384737 128 ntBASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 ZSCAN12P1-201ENST00000406489 419 ntBASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 RPS7P15-201ENST00000415804 584 ntBASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 AC113618.1-201ENST00000416747 285 ntBASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 TTC39DP-201ENST00000416781 1688 ntBASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 ARAFP1-201ENST00000422172 605 ntBASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 HCG25-217ENST00000422366 702 ntTSL 3 BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 FDPSP1-201ENST00000424976 1071 ntBASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 APP-209ENST00000440126 2846 ntTSL 2 BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 YWHAQP9-201ENST00000445891 512 ntBASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 RPL7P31-201ENST00000450192 724 ntBASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 AL513533.1-201ENST00000453728 415 ntBASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 DDX39BP2-208ENST00000453923 258 ntBASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 RPS4XP17-201ENST00000479057 754 ntBASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 RPS4XP15-201ENST00000489210 795 ntBASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 RN7SL518P-201ENST00000491887 280 ntBASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 SCARNA18.2-201ENST00000516882 84 ntBASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 AC105029.1-201ENST00000520250 669 ntBASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 NDUFA3P4-201ENST00000560814 250 ntBASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 AC138749.2-201ENST00000566048 167 ntBASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 MIR4437-201ENST00000581331 60 ntBASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 AC103881.1-201ENST00000603476 538 ntBASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 NQO2-209ENST00000606474 470 ntTSL 3 BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 AC093788.1-201ENST00000609356 927 ntBASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC7.65□□□□□ -1.18
NPAS3Q8IXF0 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC7.65□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms