Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
CCDC141Q6ZP82 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 UGT2B24P-201ENST00000514441 1597 ntBASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 AC136624.1-201ENST00000400791 413 ntBASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 NUDT19P3-201ENST00000404698 555 ntBASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 RN7SL188P-201ENST00000469842 285 ntBASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 AC097484.1-201ENST00000471148 389 ntBASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 AC108043.1-201ENST00000512696 574 ntBASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 MIR4691-201ENST00000583764 85 ntBASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 AC060780.2-201ENST00000589047 198 ntBASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 AC104785.1-201ENST00000603220 588 ntBASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 ALB-220ENST00000621628 1606 ntTSL 5 BASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 AC114774.1-201ENST00000507410 1770 ntBASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
CCDC141Q6ZP82 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC8.02□□□□□ -1.12
CCDC141Q6ZP82 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC8.02□□□□□ -1.13
CCDC141Q6ZP82 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
CCDC141Q6ZP82 DPY19L2P2-203ENST00000435536 1858 ntBASIC8.02□□□□□ -1.13
CCDC141Q6ZP82 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CCDC141Q6ZP82 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CCDC141Q6ZP82 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
CCDC141Q6ZP82 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CCDC141Q6ZP82 RN7SKP95-201ENST00000362860 303 ntBASIC8.02□□□□□ -1.13
CCDC141Q6ZP82 AL353625.1-202ENST00000366273 571 ntBASIC8.02□□□□□ -1.13
CCDC141Q6ZP82 SNORA51.8-201ENST00000384234 132 ntBASIC8.02□□□□□ -1.13
CCDC141Q6ZP82 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC8.02□□□□□ -1.13
CCDC141Q6ZP82 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC8.02□□□□□ -1.13
CCDC141Q6ZP82 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC8.02□□□□□ -1.13
CCDC141Q6ZP82 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC8.02□□□□□ -1.13
CCDC141Q6ZP82 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC8.02□□□□□ -1.13
CCDC141Q6ZP82 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC8.02□□□□□ -1.13
CCDC141Q6ZP82 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC8.02□□□□□ -1.13
CCDC141Q6ZP82 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CCDC141Q6ZP82 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
CCDC141Q6ZP82 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CCDC141Q6ZP82 MFSD4BP1-201ENST00000513330 1552 ntBASIC8.02□□□□□ -1.13
CCDC141Q6ZP82 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
CCDC141Q6ZP82 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC8.02□□□□□ -1.13
CCDC141Q6ZP82 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC8.02□□□□□ -1.13
CCDC141Q6ZP82 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC8.02□□□□□ -1.13
CCDC141Q6ZP82 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC8.02□□□□□ -1.13
CCDC141Q6ZP82 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC8.02□□□□□ -1.13
CCDC141Q6ZP82 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CCDC141Q6ZP82 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC8.01□□□□□ -1.13
CCDC141Q6ZP82 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
CCDC141Q6ZP82 RNA5SP123-201ENST00000363244 119 ntBASIC8.01□□□□□ -1.13
CCDC141Q6ZP82 CYB5AP4-201ENST00000396692 399 ntBASIC8.01□□□□□ -1.13
CCDC141Q6ZP82 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC8.01□□□□□ -1.13
CCDC141Q6ZP82 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC8.01□□□□□ -1.13
CCDC141Q6ZP82 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC8.01□□□□□ -1.13
CCDC141Q6ZP82 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC8.01□□□□□ -1.13
CCDC141Q6ZP82 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC8.01□□□□□ -1.13
CCDC141Q6ZP82 HIGD1AP5-201ENST00000529959 259 ntBASIC8.01□□□□□ -1.13
CCDC141Q6ZP82 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC8.01□□□□□ -1.13
CCDC141Q6ZP82 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC8.01□□□□□ -1.13
CCDC141Q6ZP82 uc_338.18-201ENST00000615451 175 ntBASIC8.01□□□□□ -1.13
CCDC141Q6ZP82 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC8.01□□□□□ -1.13
CCDC141Q6ZP82 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC8.01□□□□□ -1.13
CCDC141Q6ZP82 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC8.01□□□□□ -1.13
CCDC141Q6ZP82 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
CCDC141Q6ZP82 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CCDC141Q6ZP82 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CCDC141Q6ZP82 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
CCDC141Q6ZP82 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CCDC141Q6ZP82 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC8.01□□□□□ -1.13
CCDC141Q6ZP82 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
CCDC141Q6ZP82 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CCDC141Q6ZP82 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CCDC141Q6ZP82 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC8.01□□□□□ -1.13
CCDC141Q6ZP82 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CCDC141Q6ZP82 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CCDC141Q6ZP82 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CCDC141Q6ZP82 RN7SKP103-201ENST00000363848 320 ntBASIC8□□□□□ -1.13
CCDC141Q6ZP82 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC8□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms