Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 VN1R20P-201ENST00000425215 966 ntBASIC8.67□□□□□ -1.02
RC3H1Q5TC82 C1DP1-201ENST00000426049 402 ntBASIC8.67□□□□□ -1.02
RC3H1Q5TC82 RAC1P8-201ENST00000427086 527 ntBASIC8.67□□□□□ -1.02
RC3H1Q5TC82 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC8.67□□□□□ -1.02
RC3H1Q5TC82 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
RC3H1Q5TC82 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC8.67□□□□□ -1.02
RC3H1Q5TC82 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
RC3H1Q5TC82 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC8.67□□□□□ -1.02
RC3H1Q5TC82 RPL26P30-201ENST00000453533 435 ntBASIC8.67□□□□□ -1.02
RC3H1Q5TC82 CCNB1IP1P3-201ENST00000454702 829 ntBASIC8.67□□□□□ -1.02
RC3H1Q5TC82 RPL7P32-201ENST00000457119 744 ntBASIC8.67□□□□□ -1.02
RC3H1Q5TC82 RN7SL552P-201ENST00000462094 276 ntBASIC8.67□□□□□ -1.02
RC3H1Q5TC82 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC8.67□□□□□ -1.02
RC3H1Q5TC82 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
RC3H1Q5TC82 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC8.67□□□□□ -1.02
RC3H1Q5TC82 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
RC3H1Q5TC82 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
RC3H1Q5TC82 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC8.67□□□□□ -1.02
RC3H1Q5TC82 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC8.67□□□□□ -1.02
RC3H1Q5TC82 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC8.67□□□□□ -1.02
RC3H1Q5TC82 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
RC3H1Q5TC82 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
RC3H1Q5TC82 BPTFP1-201ENST00000579209 492 ntBASIC8.67□□□□□ -1.02
RC3H1Q5TC82 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC8.67□□□□□ -1.02
RC3H1Q5TC82 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC8.67□□□□□ -1.02
RC3H1Q5TC82 RN7SL622P-201ENST00000585292 275 ntBASIC8.67□□□□□ -1.02
RC3H1Q5TC82 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
RC3H1Q5TC82 AC103792.1-201ENST00000603591 919 ntBASIC8.67□□□□□ -1.02
RC3H1Q5TC82 AC131902.3-201ENST00000611767 581 ntBASIC8.67□□□□□ -1.02
RC3H1Q5TC82 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC8.67□□□□□ -1.02
RC3H1Q5TC82 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
RC3H1Q5TC82 AL122023.1-201ENST00000622847 530 ntBASIC8.67□□□□□ -1.02
RC3H1Q5TC82 AC004836.1-201ENST00000623032 634 ntBASIC8.67□□□□□ -1.02
RC3H1Q5TC82 AC022400.9-201ENST00000623633 273 ntBASIC8.67□□□□□ -1.02
RC3H1Q5TC82 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC8.67□□□□□ -1.02
RC3H1Q5TC82 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
RC3H1Q5TC82 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
RC3H1Q5TC82 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
RC3H1Q5TC82 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 AL355852.1-201ENST00000454081 1771 ntBASIC8.66□□□□□ -1.02
RC3H1Q5TC82 AC009948.3-201ENST00000603415 1798 ntBASIC8.66□□□□□ -1.02
RC3H1Q5TC82 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 Z97832.2-201ENST00000605896 4261 ntBASIC8.66□□□□□ -1.02
RC3H1Q5TC82 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 RNA5SP188-201ENST00000362916 129 ntBASIC8.66□□□□□ -1.02
RC3H1Q5TC82 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 YWHAZP6-201ENST00000399764 738 ntBASIC8.66□□□□□ -1.02
RC3H1Q5TC82 AL096711.1-201ENST00000404780 554 ntBASIC8.66□□□□□ -1.02
RC3H1Q5TC82 ATF1P1-201ENST00000406040 927 ntBASIC8.66□□□□□ -1.02
RC3H1Q5TC82 CEACAMP8-201ENST00000413902 580 ntBASIC8.66□□□□□ -1.02
RC3H1Q5TC82 AL773545.3-201ENST00000414297 706 ntBASIC8.66□□□□□ -1.02
RC3H1Q5TC82 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 CNOT7P1-201ENST00000429006 852 ntBASIC8.66□□□□□ -1.02
RC3H1Q5TC82 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 TRIM60P18-201ENST00000441518 828 ntBASIC8.66□□□□□ -1.02
RC3H1Q5TC82 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 OR52Y1P-201ENST00000452418 828 ntBASIC8.66□□□□□ -1.02
RC3H1Q5TC82 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 RPS20P24-201ENST00000457473 361 ntBASIC8.66□□□□□ -1.02
RC3H1Q5TC82 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 AC084024.2-201ENST00000503480 791 ntBASIC8.66□□□□□ -1.02
RC3H1Q5TC82 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 TCP11X3P-202ENST00000514289 1254 ntBASIC8.66□□□□□ -1.02
RC3H1Q5TC82 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 NATP-201ENST00000523491 878 ntBASIC8.66□□□□□ -1.02
RC3H1Q5TC82 AP001207.1-201ENST00000524051 481 ntBASIC8.66□□□□□ -1.02
RC3H1Q5TC82 HIGD1AP17-201ENST00000554576 276 ntBASIC8.66□□□□□ -1.02
RC3H1Q5TC82 AL445383.1-201ENST00000554689 874 ntBASIC8.66□□□□□ -1.02
RC3H1Q5TC82 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 AC006504.3-201ENST00000586818 523 ntBASIC8.66□□□□□ -1.02
RC3H1Q5TC82 AC008507.1-201ENST00000587506 734 ntBASIC8.66□□□□□ -1.02
RC3H1Q5TC82 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 MTCO3P22-201ENST00000603219 784 ntBASIC8.66□□□□□ -1.02
RC3H1Q5TC82 AL022154.1-201ENST00000604698 785 ntBASIC8.66□□□□□ -1.02
RC3H1Q5TC82 Y_RNA.812-201ENST00000610788 101 ntBASIC8.66□□□□□ -1.02
RC3H1Q5TC82 MIR6862-1-201ENST00000613016 70 ntBASIC8.66□□□□□ -1.02
RC3H1Q5TC82 Y_RNA.784-201ENST00000613803 101 ntBASIC8.66□□□□□ -1.02
RC3H1Q5TC82 MIR6862-2-201ENST00000614755 70 ntBASIC8.66□□□□□ -1.02
RC3H1Q5TC82 Y_RNA.787-201ENST00000616522 101 ntBASIC8.66□□□□□ -1.02
RC3H1Q5TC82 Y_RNA.780-201ENST00000617336 101 ntBASIC8.66□□□□□ -1.02
RC3H1Q5TC82 Y_RNA.801-201ENST00000619005 101 ntBASIC8.66□□□□□ -1.02
RC3H1Q5TC82 AC079684.1-201ENST00000621405 437 ntBASIC8.66□□□□□ -1.02
RC3H1Q5TC82 CR381653.2-201ENST00000624041 768 ntBASIC8.66□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms