Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH12P55289 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.43□□□□□ -1.54
CDH12P55289 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
CDH12P55289 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC5.43□□□□□ -1.54
CDH12P55289 AC084824.2-201ENST00000548906 345 ntBASIC5.43□□□□□ -1.54
CDH12P55289 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.43□□□□□ -1.54
CDH12P55289 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH12P55289 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.43□□□□□ -1.54
CDH12P55289 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.43□□□□□ -1.54
CDH12P55289 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.43□□□□□ -1.54
CDH12P55289 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.43□□□□□ -1.54
CDH12P55289 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH12P55289 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.43□□□□□ -1.54
CDH12P55289 AC018754.1-201ENST00000607486 925 ntBASIC5.43□□□□□ -1.54
CDH12P55289 AC092681.3-201ENST00000609463 678 ntBASIC5.43□□□□□ -1.54
CDH12P55289 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.43□□□□□ -1.54
CDH12P55289 AL645927.2-201ENST00000618350 349 ntBASIC5.43□□□□□ -1.54
CDH12P55289 AL445984.1-201ENST00000637834 659 ntBASIC5.43□□□□□ -1.54
CDH12P55289 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CDH12P55289 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
CDH12P55289 CASC19-261ENST00000641853 1638 ntBASIC5.43□□□□□ -1.54
CDH12P55289 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDH12P55289 AL592429.1-201ENST00000403909 1473 ntBASIC5.43□□□□□ -1.54
CDH12P55289 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH12P55289 AC090220.1-201ENST00000593078 1699 ntBASIC5.43□□□□□ -1.54
CDH12P55289 FBXL21-201ENST00000297158 1305 ntBASIC5.43□□□□□ -1.54
CDH12P55289 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH12P55289 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.43□□□□□ -1.54
CDH12P55289 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH12P55289 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH12P55289 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDH12P55289 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDH12P55289 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH12P55289 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
CDH12P55289 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.42□□□□□ -1.54
CDH12P55289 NLRP3P1-201ENST00000622303 1785 ntBASIC5.42□□□□□ -1.54
CDH12P55289 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.42□□□□□ -1.54
CDH12P55289 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH12P55289 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH12P55289 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH12P55289 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.42□□□□□ -1.54
CDH12P55289 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH12P55289 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.42□□□□□ -1.54
CDH12P55289 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH12P55289 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH12P55289 MIR122-201ENST00000385044 85 ntBASIC5.42□□□□□ -1.54
CDH12P55289 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.42□□□□□ -1.54
CDH12P55289 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.42□□□□□ -1.54
CDH12P55289 AL158827.1-201ENST00000416300 391 ntBASIC5.42□□□□□ -1.54
CDH12P55289 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.42□□□□□ -1.54
CDH12P55289 MTCO1P51-201ENST00000427672 1060 ntBASIC5.42□□□□□ -1.54
CDH12P55289 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.42□□□□□ -1.54
CDH12P55289 AC011242.1-201ENST00000433596 1158 ntBASIC5.42□□□□□ -1.54
CDH12P55289 GAPDHP75-201ENST00000433910 943 ntBASIC5.42□□□□□ -1.54
CDH12P55289 AC138761.5-201ENST00000433967 325 ntBASIC5.42□□□□□ -1.54
CDH12P55289 GAPDHP59-201ENST00000435908 267 ntBASIC5.42□□□□□ -1.54
CDH12P55289 RPS7P3-201ENST00000443360 580 ntBASIC5.42□□□□□ -1.54
CDH12P55289 MOB1AP2-201ENST00000446060 614 ntBASIC5.42□□□□□ -1.54
CDH12P55289 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.42□□□□□ -1.54
CDH12P55289 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDH12P55289 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.42□□□□□ -1.54
CDH12P55289 AC108729.1-201ENST00000487812 947 ntBASIC5.42□□□□□ -1.54
CDH12P55289 RN7SL205P-201ENST00000490174 284 ntBASIC5.42□□□□□ -1.54
CDH12P55289 RN7SL362P-201ENST00000494228 267 ntBASIC5.42□□□□□ -1.54
CDH12P55289 AC113367.2-201ENST00000505749 160 ntBASIC5.42□□□□□ -1.54
CDH12P55289 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.42□□□□□ -1.54
CDH12P55289 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.42□□□□□ -1.54
CDH12P55289 AC022826.1-201ENST00000519383 805 ntBASIC5.42□□□□□ -1.54
CDH12P55289 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.42□□□□□ -1.54
CDH12P55289 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.42□□□□□ -1.54
CDH12P55289 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC5.42□□□□□ -1.54
CDH12P55289 UBTFL9-201ENST00000534504 1148 ntBASIC5.42□□□□□ -1.54
CDH12P55289 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC5.42□□□□□ -1.54
CDH12P55289 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.42□□□□□ -1.54
CDH12P55289 BTG1P1-201ENST00000540396 508 ntBASIC5.42□□□□□ -1.54
CDH12P55289 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.42□□□□□ -1.54
CDH12P55289 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.42□□□□□ -1.54
CDH12P55289 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.42□□□□□ -1.54
CDH12P55289 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.42□□□□□ -1.54
CDH12P55289 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.42□□□□□ -1.54
CDH12P55289 AC007346.1-201ENST00000569208 867 ntBASIC5.42□□□□□ -1.54
CDH12P55289 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.42□□□□□ -1.54
CDH12P55289 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.42□□□□□ -1.54
CDH12P55289 RN7SL230P-201ENST00000580835 303 ntBASIC5.42□□□□□ -1.54
CDH12P55289 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.42□□□□□ -1.54
CDH12P55289 uc_338.29-201ENST00000615099 168 ntBASIC5.42□□□□□ -1.54
CDH12P55289 HTR1DP1-201ENST00000616500 888 ntBASIC5.42□□□□□ -1.54
CDH12P55289 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.42□□□□□ -1.54
CDH12P55289 AC068880.4-201ENST00000623082 495 ntBASIC5.42□□□□□ -1.54
CDH12P55289 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.42□□□□□ -1.54
CDH12P55289 AL357140.4-201ENST00000636827 412 ntBASIC5.42□□□□□ -1.54
CDH12P55289 Z83820.1-201ENST00000456978 1499 ntBASIC5.42□□□□□ -1.54
CDH12P55289 CR382285.2-201ENST00000624662 1495 ntBASIC5.42□□□□□ -1.54
CDH12P55289 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH12P55289 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CDH12P55289 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH12P55289 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH12P55289 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH12P55289 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.42□□□□□ -1.54
CDH12P55289 GVINP1-202ENST00000531871 7271 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms